Kocuria palustris: KPaMU14_02425
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Entry
KPaMU14_02425 CDS
T04045
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kpl
Kocuria palustris
Pathway
kpl03420
Nucleotide excision repair
kpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KPaMU14_02425
03430 Mismatch repair
KPaMU14_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpl03400
]
KPaMU14_02425
Enzymes [BR:
kpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KPaMU14_02425
DNA repair and recombination proteins [BR:
kpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPaMU14_02425
MMR (mismatch excision repair)
Other MMR factors
KPaMU14_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Viral_helicase1
Pox_A6
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALB02643
LinkDB
All DBs
Position
558108..560480
Genome browser
AA seq
790 aa
AA seq
DB search
MDFLSDNPLLSSPPASGAASAMESAPGRRSPESLLEGLNGPQRQAVEHAGSPLLIVAGAG
SGKTRVLTHRIAYLLGTGRAHPGEILAITFTNKAATEMRERVVELVGPSARTMSLSTFHS
FCVRVLRREATAIGLKSTFSIYDSADSLRVITAVAKQHELDPKRFAPKALQHAISSLKNE
LIDDETYLSRATGSDPWEQAVAQTYRGYTQRLRAANALDFDDLISQTVHMLRAFPQIAEY
YRRRYRHVLVDEYQDTNHAQYSLIREIVGHQGDPTGLPPAELTVVGDSDQSIYAFRGADI
RNITEFEKDYPSARTVLLEQNYRSTQTILSAANAVISRNAGRQDKRLWTAEGDGTEIVGY
AAESAHEEARWIAEEIDRLQDAEGIRPADVAIFYRTNAQSRSLEEILMRVGLPYKVVGGT
RFYERKEIKDALAYMRALLNPDDEVTVRRIINEPKRGIGDRAQGALAALAERDGLSFMDA
ARRAEEAPGMASRSLNAVKAFVQLMDDLATVAEGNSPASVVEAVLEQTGYLEALRTSEDP
QDETRVENLAELVAVVREHEREHPEHGLAEFLEHVALVADADQIPDPDEQSQGVVTLMTL
HTAKGLEFPVVFLTGMEHGIFPHQRSMTDEKEMQEERRLAYVGITRARRRLYLTRAENRS
QWGQTQYNPPSPFLEEIPSELIRWEREGSGARPGWGGAAYGSGLMGSGGSQGGAAATFRR
GARTPAAGRVDPQREVLALSIGEQVDHKSFGRGTVVQLEGRGDRVIAKVRFGSEEKRLLV
RSAPLSRVSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctctcggacaaccccctgctctcctccccgccggcctcgggcgcagccagc
gccatggagtcggctccggggcggcgcagcccggaatcactcctggaggggctcaacggg
ccgcagcgccaggctgtcgagcacgccggctcgccgctgctgatcgtggccggggcgggc
tcgggcaagacccgcgtgctgacccaccgcatcgcctatctgctgggcacggggcgggcg
catccgggggagatcctggcgatcaccttcaccaacaaggccgccacggagatgcgcgag
cgcgtggtcgagctcgtggggccgtctgcgcggaccatgtccctgtcgacgttccactcc
ttctgcgtgcgcgtgctgcggcgggaggccaccgcgatcgggctgaagtccacgttctcg
atctacgactccgccgattcgctgcgagtgatcaccgcagtggccaagcagcacgagctg
gaccccaagcgcttcgcccccaaggcgctgcagcacgccatctcctcgctgaagaacgag
ctgatcgacgacgagacctatctctcccgggccaccgggtcggatccgtgggagcaggcg
gtcgcgcagacctaccgcggctacacgcagcggctgcgtgcggccaacgccctggacttc
gacgacctcatctcgcagacggtgcacatgctgcgggccttccctcagatcgcggagtac
taccgccgccgctaccggcacgtcctggtcgacgagtaccaggacaccaaccacgcccag
tactccctgatccgggagatcgtggggcatcagggtgatcccacgggcctgccgcctgcg
gagctgacggtcgtgggcgactccgaccagtccatctacgccttccgcggggcggacatc
cgcaacatcaccgagttcgagaaggactatccctccgcccggaccgtgctgctggagcag
aactaccgctcgacccagaccatcctctccgcggccaacgccgtgatctcccgcaatgcc
gggcgccaggacaagaggctgtggaccgccgagggcgatggcaccgagatcgtgggctac
gcggccgagtccgcccacgaggaggcgcgctggatcgccgaggagatcgaccgcctccag
gatgccgagggcatccgtccggcggacgtggcgatcttctaccgcaccaacgcgcagtcc
cgctcgctcgaggagatcctcatgcgcgtgggcctgccctacaaggtcgtgggcggcacc
cggttctacgagcgcaaggagatcaaggacgccctggcctacatgcgcgcgctgctgaac
ccggatgacgaggtcacggtccggcgcatcatcaacgagcccaagcgcgggatcggcgac
cgagcccagggcgctctggccgccctggccgagcgcgacggactgtccttcatggacgcc
gcccgccgggccgaggaggccccgggcatggcctcgcgctcgctgaacgcggtgaaggcc
ttcgtgcagctcatggacgacctcgcgaccgtcgcggagggcaacagcccggcctcggtg
gtggaggccgtgctggagcagaccggctacctggaggccctgcgcacctcggaggacccc
caggacgagacccgcgtggagaacctggccgagctcgtggcggtggtccgcgagcacgag
cgcgagcatccggagcacgggctggcggagttcctggagcacgtggccctggtcgccgac
gccgatcagatccccgatcccgacgagcagtcgcagggcgtggtgaccctgatgaccctg
cacacggccaagggcctcgagttcccggtggtgttcctcaccggcatggagcacgggatc
ttcccgcatcagcgctccatgactgatgagaaggagatgcaggaggagcggcgcctggcc
tacgtggggatcacccgcgcccgccgccgcctctacctgacccgcgcggagaaccgttcg
cagtgggggcagacccagtacaacccgccgagccccttcctggaggagatcccgtccgag
ctgatccgctgggagcgcgagggctccggcgcgcggccgggctggggcggggccgcctac
ggctccgggctcatgggctccggcggctcgcagggcggggcggcggccacgttccggcgc
ggtgcccgcacaccggcagcggggcgcgtggatccgcagcgggaggtcctggcgctgagc
atcggcgagcaggtcgaccacaagagcttcgggcgcggcaccgtggtgcagctggagggc
cgcggggaccgggtgatcgccaaggtcaggttcggctcggaggagaagcggctgctcgtg
cgctcggccccgctgagcagggtctccgagtga
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integrated database retrieval system
