Kocuria palustris: KPaMU14_03460
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Entry
KPaMU14_03460 CDS
T04045
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
kpl
Kocuria palustris
Pathway
kpl00300
Lysine biosynthesis
kpl01100
Metabolic pathways
kpl01120
Microbial metabolism in diverse environments
kpl01230
Biosynthesis of amino acids
Module
kpl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KPaMU14_03460
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kpl01002
]
KPaMU14_03460
Enzymes [BR:
kpl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KPaMU14_03460
Peptidases and inhibitors [BR:
kpl01002
]
Metallo peptidases
Family M20
KPaMU14_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF732
Motif
Other DBs
NCBI-ProteinID:
ALB04230
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All DBs
Position
772450..773529
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AA seq
359 aa
AA seq
DB search
MDLAADPAQLTAALIDVESVSDHETPLADLVEEALRGLEHLCVHRDGDAIIARTELGRAE
RVVLAGHLDTVPLPTAAGSRGTVPSSWEDHDGDLTLYGRGATDMKGGVAVQLGLAAELTE
PSRDITYVFYDHEEVDSAKSGLARLERSVPDLLQADFAVLLEPTDGTVEGGCNGTLRFVI
APQGLAAHSGRAWRGDNAIHKLADVLSVLADYEPATIEVEGLAYREGLNAIRISGGTAGN
VIPDAASVEINYRFAPDKTLEQAQQHCRELFPGHELEFVDLSPAARPGLDRASAAAFVAA
VGQEPKPKYGWTDVARFSAMGVPAVNFGPGDALLAHTDDEHVSAEAIRQCRRVLLSWLS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ctggacctggccgcggatcccgcgcagctcacggccgcgctgatcgatgtcgagtccgtg
tcggatcacgagacgccgctggcggacctggtcgaggaggcgctgcgggggctggagcac
ctgtgcgtgcaccgcgacggcgatgcgatcatcgcccgcaccgagctgggccgggccgaa
cgcgtcgtgcttgcaggtcacctggacacggtgccgctgcccaccgccgcgggttcgcgc
gggacggtgccctcgagctgggaggaccacgacggcgatctcacgctctacggccgcggc
gccaccgacatgaagggcggggtggccgtgcagctcgggctggcggccgagctcacggag
ccgagccgggacatcacctacgtcttctacgaccacgaggaggtcgactcggccaagtcc
gggctggcccgtctggagcgcagcgtcccggacctgctgcaggcggacttcgcggtgctg
ctcgagcccaccgacggcacggtcgagggcggctgcaacggcacgctgcgcttcgtgatc
gccccgcagggactggccgcgcactcgggccgggcctggcgcggggacaacgcgatccac
aagctcgccgacgtgctgtccgtgctggccgactacgagccggccacgatcgaggtcgag
gggctggcgtaccgggaggggctcaacgcgatccgcatcagcgggggcaccgcgggcaat
gtgatcccggacgcggcctcggtcgagatcaactaccgctttgccccggacaagaccctc
gagcaggcccagcagcactgccgggagctgttcccgggccatgagctggagttcgtggac
ctctccccggcggcacgccccgggctggaccgggcgtccgcggcggctttcgtggcagcc
gtcgggcaggagcccaagcccaaatacggctggaccgacgtggcccgcttctcggccatg
ggcgtgccggccgtgaacttcggccccggagacgccctgctggcccacacggacgacgag
cacgtctcggccgaggcgatccgtcagtgccgccgggtcctgctgagctggctgtcctag
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