Kocuria palustris: KPaMU14_04535
Help
Entry
KPaMU14_04535 CDS
T04045
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kpl
Kocuria palustris
Pathway
kpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KPaMU14_04535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpl03400
]
KPaMU14_04535
Enzymes [BR:
kpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KPaMU14_04535
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KPaMU14_04535
DNA repair and recombination proteins [BR:
kpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KPaMU14_04535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
ALB02949
LinkDB
All DBs
Position
1022380..1023318
Genome browser
AA seq
312 aa
AA seq
DB search
MPELPEAEVVRRGLERWTVGRRVETVEVLDPRSLRRHIGGPGDFVQRLQGASILDAVRRG
KFLWLPVALASGDELALMMHLGMSGQALIQGDDQPDERHLKVRLGLSETPDGLPGQLRFV
DQRIFGGMFLDPLEPTADGHPGGRGALGLPLIPVHAAHIARDPLDPDFDPDAFHAALRRR
RTGLKRALLDQGLISGIGNIYADEALWSARLHYARPTETLTRPETQRVVEAVQDVMARAL
EAGGTSFDSLYVNINGESGYFSRSLNAYGRAGEACPRCEAEGRDGVIVREQFMNRSSYRC
SVCQRRPRRARY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggccgaggtcgtgcgccgtggcctcgagcgctggacggtcggg
cgccgggtcgagaccgtcgaggtcctggacccgcgctccctgcgccgccacataggcggt
ccgggcgacttcgtgcagcggctgcagggcgcgtccatcctggatgcggtgcgccgcggc
aagttcctctggctgcccgtagcgctggcctccggcgacgagctcgcgctgatgatgcac
ctggggatgtccggccaggcgctgatccagggagatgaccagcccgacgagcgccacctc
aaggtccgcctggggctctccgagactcccgacgggctgcccgggcagctgcgcttcgtg
gaccagcgcatcttcggtggcatgttcctggatcccctggagcccaccgccgacggccat
cccggcggccggggcgccctgggactgccgctcattccggtccacgccgcgcatatcgcg
cgtgatccgctggatccggacttcgatcccgacgccttccacgccgccctgcggcgacgg
aggaccgggctcaagcgcgccctgctggatcagggcctgatctccgggatcggcaacatc
tacgccgacgaggccctgtggtccgcccgcttgcactacgcccgccccaccgagacgctc
acgcgtccggagacccagcgggtggtcgaggcggtgcaggacgtcatggcccgggccctg
gaggccggagggacgagcttcgattccctgtacgtgaacatcaacggggaatccggctac
ttctcccgctccctcaatgcctacggccgcgccggtgaggcgtgcccgcgctgcgaggcc
gagggccgcgatggcgtgatcgtgcgcgagcagttcatgaaccggtcgtcgtaccgctgc
tccgtctgccagcgccgcccccgccgcgcgcggtactga
DBGET
integrated database retrieval system
