Kocuria palustris: KPaMU14_06425
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Entry
KPaMU14_06425 CDS
T04045
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
kpl
Kocuria palustris
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpl03019
]
KPaMU14_06425
Enzymes [BR:
kpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPaMU14_06425
Messenger RNA biogenesis [BR:
kpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPaMU14_06425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALB03220
LinkDB
All DBs
Position
complement(1454954..1457851)
Genome browser
AA seq
965 aa
AA seq
DB search
MSSPAERYMAAKARTSEARTYRSRFAASLDFELDDFQIEGCRALEEGRGVLVAAPTGAGK
TVVGEFAVDLALHRGQKAFYTTPIKALSNQKHSDFVRRFGAERVGLLTGDTSINSEADVV
VMTTEVLRNMLYADSPTLSNLGFVVMDEVHYLADRFRGAVWEEVIIHLPPHVQMACLSAT
VSNAEEFGDWLGAVRGETDVVVSEHRPVPLWQHMQVGTELMDLFVTDTVEQAAEKAERLE
RAREAGLEARIEPPAVNPELLHLARSQASGRRGPGGRSRERMRQKNGRGRGGHGRDDRGR
GSGRDDRGGSIPRISRPHLLRQLQSEGLLPAITFIFSRAGCDDAVTQCLAADLQLTTEAE
RRTIRAVTAEAAASLNDADLDVLGFRQWRDGLLHGVAAHHAGLLPLFKEVVEELFTQGLI
KAVFATETLALGINMPARSVVLERLDKFNGEARVDITPGEYTQLTGRAGRRGIDVEGHAV
VLWRPGTDPQAVAGLASKRTYPLNSSFRPTYNMSVNLIAQFGAQRTRGILESSFAQFQAD
RSVVGIAREVRRNQEALAGYEESMTCHLGDFTEYAALRRELKDTEKSAEKARSHTRRTEA
AASLQDLLPGDVVDIPTGRNRGFAVVVSPDPHSPQPRPSIVTHDAHLRRLGAQDLEGPLE
PISRIRLPKRIAVSSLKERKVISGAMRSALQEGVPPRTGGRSDQPRFARGGSGSEARITE
LRRRLREHPCHGCSDREQHARWAERWERLRRETDRLMRQLDGRTNAVAARFDRITSVLHE
LDYLERRDDELRLTPAGQSLRRIYGDRDLLLAMGLRDGILDGLDPASIAAVATVFTYQAK
RQDAGARPRLPSAKIEQAVATAVTHWTRLTDLEEQHRVDQTAEPELGMVGPMHRWARGGS
LRATLEDTELAAGDFVRWTKQVIDLLDQVASIRGLDAQTRTGCQRAVDLIRRGVVVQSVL
EDPEP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtccagccgagcgatacatggcagccaaggcccgcacctccgaggccaggacc
taccgcagccgcttcgcggccagcctggacttcgagctcgacgacttccagatcgagggc
tgccgtgcgctcgaggagggccgcggcgtcctggtcgcagcacccaccggcgccggcaag
accgtcgtgggggagttcgccgtcgacctggcgctgcatcgcgggcagaaggcgttctac
accacgcccatcaaggcgctgagcaaccagaagcactcggacttcgtgcgccgcttcggt
gccgagcgcgtggggctgctcaccggcgacacctcgatcaactccgaggcggacgtggtg
gtgatgaccaccgaggtcctgcgcaacatgctctacgcggactcgcccaccctgagcaac
ctcggcttcgtggtcatggacgaggtccactacctggccgatcgcttccgcggcgccgtg
tgggaggaggtcatcatccacctgccgccgcacgtgcagatggcctgcctgtccgccacg
gtctccaacgcggaggagttcggcgattggctgggcgccgtgcgcggggagacggacgtg
gtggtctccgagcaccgtccggtgccgctgtggcagcacatgcaggtcggcaccgagctg
atggacctgttcgtcacggacacggtcgagcaggccgccgagaaggccgaacggctcgag
cgagcgcgagaggccgggctcgaggcccggatcgagccaccggcggtgaaccccgagctg
ctgcatctggcccgctcccaggcctccggacggcgtggtccgggtgggcggtcccgagag
cgcatgcgccagaagaacggccgagggcgcggcgggcacggacgggacgaccgcggacgc
ggctccgggcgcgacgaccgcggcggctccatcccgcgcatcagccgcccccaccttctc
cgacagctgcagagcgagggcctgctgccggcgatcacgttcatcttctcccgagccggc
tgcgacgacgccgtgacccagtgcctggccgccgacctgcagctgactaccgaggccgag
cggcgcaccatccgcgctgtgaccgcggaggcggccgcctcgctcaacgacgccgatctg
gacgtcctcggcttccgacagtggcgggacggcctgctgcacggcgtggcggcccaccac
gcggggctgctgccgctgttcaaggaggtcgtggaggagctgttcacccaggggctgatc
aaagccgtgttcgccaccgagaccctggcgctgggcatcaacatgccggcgcgctccgtg
gtgctcgagcgcctggacaagttcaacggcgaggcccgcgtggacatcacgccgggggag
tacacccagctcaccggacgcgcggggcgccgagggatcgacgtggagggccacgcggtc
gtgctgtggcggcccggcacggacccccaggccgtggccgggctggcctccaagcgcacg
tacccgctgaactcgagcttccggccgacctacaacatgtcggtcaacctgatcgcacag
ttcggcgcccagcgcacccgcgggatcctggagtcgtcgttcgcccagttccaggccgat
cgctcggtcgtgggcatcgcccgggaagtgcgccgcaatcaggaggcgctggccggctac
gaggagtccatgacctgccacctgggcgacttcacggagtacgcggcgctgcgcagggag
ctcaaggacaccgagaagtcggccgagaaggcccgctcgcacacccggcgcacggaggcc
gcggcatcgctgcaggacctgctgcccggcgatgtggtggacatccccactggccgcaac
cggggcttcgccgtggtggtctccccggatccgcactcgccgcagccgcggccgtcgatc
gtcacccacgacgcccacctgcgacgcctgggcgctcaggatctcgagggtccgctcgag
ccgatctcgcgcatccgtctgcccaagcggatcgcggtctcctcgctgaaggagcgcaag
gtcatctccggggccatgcgctccgcgctgcaggagggcgtgcctccgcggacgggaggc
cgcagcgatcagccgcgcttcgcccgcggcggctcgggctcggaggcgcgcatcacggag
ctgcgccggcgcctgcgcgagcacccctgccacggctgcagcgaccgcgagcagcacgcc
cgctgggccgagcgctgggagcggctgcgccgcgagaccgaccgcctcatgcgccagctc
gacggacgcacgaacgcggtggccgcccgcttcgaccgcatcacctcggtgctgcacgag
ctcgactacctcgagcgccgtgacgacgagctgcggctgaccccggccgggcagagcctg
cggcggatctacggcgatcgcgatctcctgctggccatgggcctgcgcgacggcatcctg
gacgggctggacccggcgtccatcgccgctgtggccacggtcttcacgtatcaggccaag
cgccaggacgccggtgcgcggccgcgactgccctccgccaagatcgagcaggccgtcgcc
accgccgtgacgcactggacccggctgaccgatctggaggagcagcaccgcgtcgatcag
acggccgagcccgagctcggcatggtcggacccatgcaccgctgggcccgcggcggctcc
ctgcgcgccacgctcgaggacaccgagctggcggccggcgacttcgtgcgctggaccaag
caggtgatcgaccttctcgatcaggtggcctcgatccgcggcctcgacgcccagacacgc
accggctgccagcgcgccgtcgacctgatcagacgcggcgtggtcgtccaatccgtcctc
gaggaccctgagccctga
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