Kocuria palustris: KPaMU14_07020
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Entry
KPaMU14_07020 CDS
T04045
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kpl
Kocuria palustris
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpl03032
]
KPaMU14_07020
03400 DNA repair and recombination proteins [BR:
kpl03400
]
KPaMU14_07020
Enzymes [BR:
kpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KPaMU14_07020
DNA replication proteins [BR:
kpl03032
]
Prokaryotic type
DNA Topoisomerases
KPaMU14_07020
DNA repair and recombination proteins [BR:
kpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KPaMU14_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALB03304
LinkDB
All DBs
Position
1600171..1602720
Genome browser
AA seq
849 aa
AA seq
DB search
MAPRRSKAQKSALDELPADFEGNVVDIDVTREMEDSFLEYSYSVIYSRALPDARDGLKPV
QRRILYMMDEMGLRPDRGHVKSARVVGEVMGKLHPHGDSAIYDAMVRMALPFAQRMPLVD
GHGNFGSLDDGPAASRYTEARLAPAALQLTADLGEDVVDFVPNYDNQFMQPSVLPAAYPN
LLVNGTTGIAVGMATNMAPHNLREAVAGARHLLEHPEASLEDVMKHIPGPDLPSGGQIVG
LDGIRDAYRTGRGSFKTRAAVSIEQVTPRKQGIVVTELPYMVGPEKVIDRIKSAVQSKKL
TGISDVVDLTDRTKGLNLVIEIKNGFNPQAVLAALYKHTPLEESFGINNVALVDGRPQTL
GLLEMLRVYNQHRLTVVRRRTAHRLGKRRDRLHLVEGLLIAIVDIDEVIQIIRSSDQTAE
ARERLMTIFDLTQLQADHILELRLRQLTKFSRIELEREREELEREIAELEAILASEDRLR
EVVSGELAAVAELLGDDRRTRLLEADEAPALLAAPAAKAAAGPALEIADDPCWVFLSSTG
RMARTNDRTPLAEPGRRLKHDALRSVVATSARGEIGALTSSGRMIRVPVMDLPALSSYDG
APRLEEGTAAKDFLSLAKGERLIGLAALNEVVAMGTRQGVVKRLNADHPLNRDDWEVISL
KDGDEVVGMGPAPDSAQLVFITAQAKLLTFSAELVRAQGRTAGGVAGIKLADDDSVVFFG
PVASQDPDARVVTYARSSEALPEMGGYSVKVTPLSEYPSKGRATAGVRCQRLLSGETGLV
LAWAGHGPAKAVSAAGVARSLPTEFGRRDGSGVGVEQLPDAIGPAWSPVSSAASAAEGAD
GDAESEEQA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggccccacgcaggagcaaggcccagaagtccgcgctcgacgagctgcccgcggacttc
gagggcaacgtcgtcgacatcgacgtcacgcgggagatggaggactcgttcctcgagtac
tcgtactccgtgatctactcccgggccctgcccgacgcccgcgacggcctcaagcccgtc
cagcggcgcatcctctacatgatggatgagatgggcctgcgcccggatcgcggtcatgtg
aagtcggcccgcgtggtcggcgaggtcatgggcaagctgcacccccacggcgactccgcg
atctacgacgccatggtgcgcatggccctgcccttcgcccagcgcatgcccctggtggac
gggcacggcaacttcggctccctcgacgacggcccggcggcctcgcgctacaccgaggcc
cggctggcgccggcggcgctgcagctcacggcggatctcggcgaggacgtcgtcgacttc
gtgcccaactacgacaaccagttcatgcagccctccgtgctgccggccgcctacccgaac
ctgctggtcaacggcaccaccggcatcgcggtcggcatggccacgaacatggccccgcac
aacctgcgcgaggccgtcgccggcgcgcgccacctgctcgagcaccccgaggcgagcctc
gaggacgtcatgaagcacatccccggacccgatctgccctccggcggtcagatcgtgggc
ctggacgggatccgggacgcctaccgcaccggccgcggctccttcaagacgcgggccgcc
gtctcgatcgagcaggtcaccccccgcaagcagggcatcgtggtcaccgagctgccgtac
atggtcggcccggagaaggtcatcgaccggatcaagtccgcggtgcagtccaagaagctc
accggcatctcggacgtggtggatctgaccgaccggaccaagggactgaacctggtcatc
gagatcaagaacggcttcaacccgcaggcggtgctcgcggcgctgtacaagcacacgccg
ctcgaggagtccttcggcatcaacaacgtggccctggtcgacggccgcccccagacgctg
gggctgctcgagatgctgcgcgtgtacaaccagcaccggctcacggtcgtgcgccgtcgc
accgcgcaccgcctgggcaagcgccgcgaccggctgcacctggtcgagggcctgctgatc
gcgatcgtggacatcgacgaggtcatccagatcatccgcagctcggatcagactgccgag
gcccgcgagcgcctcatgacgatcttcgatctcacgcagctgcaggccgatcacatcctc
gagctgcgcctgcgccagctcacgaagttctcccggatcgagctcgagcgggagagggag
gagctggagcgggagatcgcagagctcgaggccatcctggcctccgaggaccggctgcgc
gaggtcgtctccggcgagctcgccgccgtcgccgagctgctgggcgacgaccgccgcacc
cggctgctcgaggccgatgaggctcccgcgctgctggccgcccccgccgccaaggccgcg
gccgggcccgcgctggagatcgccgacgacccctgctgggtcttcctctccagcaccggg
cgcatggcgcgcacgaacgaccgcacgccgctggccgagccggggcgccggctcaagcac
gatgccctccgctccgtggtggccacctccgcccgcggggagatcggcgcgctgacctcg
agcggtcggatgatccgcgtgcccgtgatggaccttccggcgctgagctcctacgacggc
gcgccccggctcgaggagggcaccgccgccaaggacttcctgtccctggccaagggcgag
cgcctgatcggactcgccgcgctgaacgaggtcgtggccatgggcacccgtcagggtgtg
gtcaagcggctgaacgcggatcacccgctgaaccgcgacgactgggaggtcatcagcctc
aaggacggcgacgaggtcgtgggcatgggcccggctcccgactcggcccagctcgtgttc
atcaccgcgcaggccaagctgctgacgttctccgccgagctggtgcgcgcccagggccgc
accgccggcggcgtggcgggtatcaagctcgccgacgacgactccgtcgtgttcttcggg
ccggtggcctcgcaggatcccgacgcccgcgtggtcacctacgcgcgctcttccgaggcc
ctgccagagatgggcggctactccgtgaaggtcactcccctgtccgagtacccgtccaag
ggccgcgcgaccgccggtgtgcgctgccagcggctgctcagcggagagaccggcctcgtg
ctcgcctgggccgggcacgggcccgccaaggcggtctccgccgccggcgtggcccgcagc
ctgcccaccgagttcggacgccgcgacggctccggcgtgggcgtggagcagctgccggac
gcgatcggccctgcgtggagcccggtgtcctccgccgcgtccgctgccgagggcgccgac
ggcgatgccgagagcgaggagcaggcatga
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