Kocuria palustris: KPaMU14_07050
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Entry
KPaMU14_07050 CDS
T04045
Name
(GenBank) DNA topoisomerase IV
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kpl
Kocuria palustris
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpl03032
]
KPaMU14_07050
03400 DNA repair and recombination proteins [BR:
kpl03400
]
KPaMU14_07050
Enzymes [BR:
kpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KPaMU14_07050
DNA replication proteins [BR:
kpl03032
]
Prokaryotic type
DNA Topoisomerases
KPaMU14_07050
DNA repair and recombination proteins [BR:
kpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KPaMU14_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
SF-assemblin
Motif
Other DBs
NCBI-ProteinID:
ALB03310
LinkDB
All DBs
Position
complement(1611350..1613458)
Genome browser
AA seq
702 aa
AA seq
DB search
MTPSTSEYNARHLSVLEGLEAVRKRPGMYIGSTDGRGLMHCLWEIIDNSVDEALAGYGQQ
ITVVLHKDGCVEVHDDGRGVPIDKEPRTGLSGVEVVFTKLHAGGKFGGGSYTASGGLHGV
GASVVNALSSRLDVQVDRGGKTYQMSFRHGEPGRFEDKGAPSPQAPFEPFVSGSELDVVG
KAKRGVTGTRVRYWADKQIFTPDAQFSYEELVRRARTTAFLIPGLRLTVRDERRLPGTAG
EMGSHEEVFQHDGGISEFAEFLASDESVTDVWRFQGEGTFTETVPVLDDSGQSRLKDVER
TCEVDVALRWGIGYDTELRSFVNIIATPKGGTHVSGFEQALVKVFRKQIAANARKLKAGN
DKIEKDDIMAGLTAVLTVRLAEPQFEGQTKEVLGTPAVRQIVSKVVEKELTAALTSGKRE
QKNQAGQVLEKVVGEMKSRISARLHKETQRRKNALETSSMPAKLVECRSTDVQRSEVFIV
EGDSALGTARMARDSAYQALFPIRGKILNVQKASLPDMLANAECAALIQVIGAGSGRTFD
LDAARYGKVIMMTDADVDGAHIRTLLLTLFYRYMRPLVEAGKVYAAVPPLHRVEIINRGS
KANEMVYTYSEAELHRLLSRLESEGRSYKEPIQRYKGLGEMDADQLAETTMDIRHRLLRR
VTMSQAEEAERAFALLMGAEVAPRRDFIIEGAARLDAEQIDA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccctcgacctccgagtacaacgcccgccacctctcggtgctggagggcctggag
gctgtgcgaaagcgcccgggcatgtacatcggctcgaccgacggccgcgggctcatgcac
tgcctctgggagatcatcgacaactcggtggacgaggccctggccggctacggccagcag
atcacggtggtgctgcacaaggacggctgcgtcgaggtccacgacgacggccgaggcgtg
cccatcgacaaggagccgcgcaccgggctgtccggcgtggaggtcgtgttcaccaagctg
catgccggcggcaagttcggcggcggctcctacacggcctccggcggtctgcacggcgtg
ggcgcctcggtggtcaacgccctgtcctcgcgcctggacgtccaggtggatcgcggcggg
aagacctaccagatgtccttccgccacggggagcccgggcgcttcgaggacaagggcgcc
ccgagcccccaggcgcccttcgagccgttcgtctcgggatccgagctcgacgtcgtcggc
aaggccaagcgcggcgtgaccgggacccgcgtgcgctactgggcggacaagcagatcttc
accccggacgcccagttctcctatgaggagctggtccgccgcgcccgcaccaccgccttc
ctgatcccggggctgcgcctcaccgtgcgcgacgagcgccgccttccgggcacggccggt
gagatgggctcccacgaggaggtcttccagcacgacggcggcatctccgagttcgccgag
ttcctggcctcggacgagtccgtgaccgatgtctggcgcttccagggcgaggggaccttc
accgagacggtgcccgtgctcgatgactccggtcagtcccggctcaaggacgtcgagcgc
acgtgcgaggtcgacgtcgccctgcggtgggggatcggctacgacaccgagctgcgcagc
ttcgtgaacatcatcgccacgcccaagggcggcacgcacgtcagcgggttcgagcaggcg
ctggtgaaggtcttccgcaagcagatcgccgcgaatgcgcgcaagctcaaggccggcaac
gacaagatcgagaaggacgacatcatggccgggctcacggccgtgctgacggtgcgcctg
gccgagccgcagttcgagggccagaccaaggaggtgctgggcaccccggcggtgcgccag
atcgtctccaaggtcgtggagaaggagctcacggcggcgctgacgtcgggcaagcgggag
cagaagaaccaggccgggcaggtcctggagaaggtcgtcggtgagatgaagtcccgcatc
tcggctcgcctgcacaaggagacgcagcggcgcaagaacgccctggagacctcgtccatg
cccgccaagctcgtcgagtgccgctcgaccgatgtgcagcgctccgaggtcttcatcgtg
gagggcgactccgcgctgggcaccgcccgcatggctcgcgactccgcctaccaggcgctg
ttccccatccgcggcaagatcctcaacgtccagaaggcgtcgctgccggacatgctggcc
aacgccgagtgcgcggccctgatccaggtcatcggcgcaggctcggggcgcacgttcgat
ctcgacgccgcccgctacggcaaggtcatcatgatgaccgacgccgatgtggacggcgcc
cacatccgcacgctgctgctgacgctgttctaccgctacatgcgcccgctcgtggaggcc
ggcaaggtctacgcggccgttcccccgctgcaccgtgtggagatcatcaaccgcggctcg
aaggccaacgagatggtctacacctactcggaggccgagctgcaccgcctgctgtcccgc
ctcgagtcggagggccgctcctacaaggagccgatccagcgctacaagggcctgggggag
atggatgccgatcagctggcggagaccaccatggacatccgccaccggctgctgcgccgg
gtgaccatgagccaggccgaggaggccgagcgcgccttcgcgctgctgatgggcgcggag
gtggccccgcgccgggacttcatcatcgagggcgccgcgcgactggatgccgagcagatc
gacgcctga
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