Kocuria palustris: KPaMU14_11175
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Entry
KPaMU14_11175 CDS
T04045
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
kpl
Kocuria palustris
Brite
KEGG Orthology (KO) [BR:
kpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpl03009
]
KPaMU14_11175
03016 Transfer RNA biogenesis [BR:
kpl03016
]
KPaMU14_11175
Enzymes [BR:
kpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
KPaMU14_11175
5.4.99.29 23S rRNA pseudouridine746 synthase
KPaMU14_11175
Ribosome biogenesis [BR:
kpl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KPaMU14_11175
Transfer RNA biogenesis [BR:
kpl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
KPaMU14_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALB03900
LinkDB
All DBs
Position
2544869..2545798
Genome browser
AA seq
309 aa
AA seq
DB search
MSRRRARPRPLSPRDGIDPVSVRLPDDRSCTAGEHLLLRFPASRAQLERLLSDGEIVDDR
GAPLPADAQCAGQRVWYHRELPVEPELPHDMPVLYEDEWLLAVDKPHGLPSTPRGGFIAQ
TALSVLRRRRGEDDLVPAHRLDRDTAGVLLLIRDPRARGAVQRQFQDRRTEKSYEAVARL
GGLVLEDLPDRRSSRLLKQRGVLQAAEVPGEPNAVTHLDPLSAFEDDDGRWAHLRLHPLT
GQTHQLRVHLAALGTPIRWDPLYPQVLPREPGDVSRPLQLLARTLRLTHPVTGQALELRS
RRRLETLPR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgccgcgcacgtcccagaccgctctcgccgcgcgatggcatcgatccggtc
tcggtccggctcccggacgaccgcagctgcacggccggcgagcacctgctgctgcgcttc
cccgcctcgcgcgcgcagctcgagcggctgctgtcggacggcgagatcgtcgacgaccgc
ggcgccccgctgcccgccgacgcccagtgcgccggtcagcgggtctggtaccaccgagag
ctgccggtggagcccgagctgccccatgacatgccggtcctctacgaggacgaatggctg
ctggcggtcgacaagccgcacgggctgccgtccacgccgcggggagggttcatcgcgcag
acggcgctgagcgtgctgcgtcgccgccgcggcgaggacgacctggttccggcgcatcgc
ctggaccgggacaccgccggcgtgctgctgctgatccgcgatccccgggcgcgcggggcc
gtgcagcgccagttccaggaccgtcgcaccgagaagtcgtacgaagcggtagcccgcctg
ggcggtctggtgctcgaggacctgccggatcggcgcagcagccggctgctcaagcagcgc
ggggtcctgcaggccgccgaggtccccggcgagcccaatgccgtgacgcacctcgatccg
ctgagcgccttcgaggacgacgacggccgctgggcccacctgcgcctgcaccccctgacc
gggcagacccaccagctgcgggtccacctggcagcgctcgggacgcccatccgctgggat
ccgctctacccgcaggtgcttccccgggagccgggcgacgtctcgcgtccgctccagctg
ctcgcgcgcaccctgcgactcacccacccggtgaccgggcaggccctggagctgaggagc
cgtcgccgcctggagaccctcccccgctga
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