Klebsiella pneumoniae subsp. pneumoniae HS11286: KPHS_01300
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Entry
KPHS_01300 CDS
T01733
Name
(RefSeq) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kpm
Klebsiella pneumoniae subsp. pneumoniae HS11286
Pathway
kpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPHS_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpm03021
]
KPHS_01300
03019 Messenger RNA biogenesis [BR:
kpm03019
]
KPHS_01300
Transcription machinery [BR:
kpm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KPHS_01300
Messenger RNA biogenesis [BR:
kpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPHS_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
11845111
NCBI-ProteinID:
YP_005224430
UniProt:
A0A0H3GH32
LinkDB
All DBs
Position
148024..149283
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaagatatctttggcgacggcgtactggagatactgcaggat
ggatttggattcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgctcgc
gtactggatctggcctccccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaggccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcatacaaccacccg
gactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggcatcccgtcacgtg
caggttgccgagatggttattgagaaagcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactctattacccgtctggcgcgtgcctacaacaccgtggttccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgtttc
tttggtgcggcacgtaacgtcgaggagggcggtagcctgaccatcatcgccacggcgctg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatggaattcctcatc
aataagctggcaatgaccaagacgaatgatgacttcttcgatatgatgaagcgctcgtaa
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