Klebsiella pneumoniae subsp. pneumoniae HS11286: KPHS_23840
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Entry
KPHS_23840 CDS
T01733
Name
(RefSeq) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpm
Klebsiella pneumoniae subsp. pneumoniae HS11286
Brite
KEGG Orthology (KO) [BR:
kpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpm03019
]
KPHS_23840
Enzymes [BR:
kpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPHS_23840
Messenger RNA biogenesis [BR:
kpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPHS_23840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
TsaE
Motif
Other DBs
NCBI-GeneID:
11847402
NCBI-ProteinID:
YP_005226684
UniProt:
A0A0H3GS59
LinkDB
All DBs
Position
2414288..2418133
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGKVLLREAARPAITYPENLPV
SQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRGLKGLIGHTQPRRLAARTVA
NRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEA
HERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGEREIRDTADALNKLDLRHTE
VLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTK
VQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQ
MTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQATAYKLTPMGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFV
NLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQLRQVVKELGLPINSEPAEY
REIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRL
WGRIAARIEPEWVEPVAQHLIKRSYSEPHWERSQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRAEIEELEHKSRRRDILVDDETLFEFY
DQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGAEQVSKLDYPNFWHQGNLKL
RLSYQFEPGADADGVTVHIPLPLLNQIEEAGFEWQIPGLRRELIIALIKSLPKPVRRNFV
PAPNYAEAFLGRAAPLELPLLDSLERELRKMTGVTIDREAWQWDQVPDHLKITFRVVDDK
NKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIWSFGTLAESYEQKRGNYKVK
AWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYF
NPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDKVRAELNDTVVEIAKQVEQI
LTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTGNGFRRLGDTLRYLQAIEKR
LEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDDVREIRWMIEELRVSFFAQQ
LGTPYPISDKRVLQAMEQITP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaat
cctgaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggt
aaagtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggtt
agccagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgcc
ggggagaccggttcgggtaaaaccacccagttgcccaaaatctgcatggagctggggcgc
gggctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgcc
aatcgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgc
ttcagcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatcctgctg
gcggagatccagcaggatcgtctgttgatgcagtacgacaccatcattatcgatgaggcg
cacgagcgcagcctgaatattgactttctgctcggctatctgaaagagctcctgccgcgc
cgcccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaag
catttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgc
tatcggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatcttt
gatgcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggt
gagcgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaa
gtgctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcac
agcgggcggcgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggc
attaagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaag
gtgcagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgc
tgcggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcg
cgcccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcag
atgaccgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataag
cgcaatatccaggacggcgtacgcctgctggaagagctgggtgccatcaccaccgatgag
caggccaccgcctataagctgacgccgatgggccgccagctcagccagctgccggtggac
ccgcgtctggcgcggatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatg
atcatcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcag
gcctctgacgaaaaacatcgccgcttccacgataaagagtccgatttcctcgccttcgtc
aatctgtggaactacctcggcgagcagcagaaggcgctgtcgtcgaatcagttccgccgc
cagtgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggacatctacacc
cagctgcgccaggtggtgaaagagcttggcctgccgatcaacagtgagccggcggaatat
cgcgagatccatactgcgctgctgaccggtctgctgtcgcacatcggcatgaaggatgcc
gataagcaggagtttaccggcgcgcgcaacgcccgcttctctattttcccgggttccggc
ctgtttaaaaagccgccgaagtggacgatggtggccgagctggtcgagaccagccgcctg
tggggccgcatcgccgcgcgcattgagccggagtgggtggagccggtagcgcagcacctg
atcaagcgctcatacagtgagccgcactgggagcggtcgcagggcgcggtaatggcgacg
gaaaaggttaccgtttacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccag
attgatccggcgctgtgtcgtgagctatttatccgccacgcgctggtagagggcgactgg
cagacgcggcacgccttcttccgcgataacctgaagctgcgcgcggaaatcgaagagctg
gagcataagtcgcgccgccgcgacatcctggtggatgacgagacgctgttcgagttctac
gaccagcgcatcagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgg
gccagccgtgaaacgccagacttgctcaattttgaaaagagcatgctgattaaagagggg
gcggagcaggtcagtaaactggactacccgaatttctggcatcagggcaacctcaagctg
cggcttagctaccagtttgaacctggcgccgacgccgatggcgtgacggtgcatattccg
ctgccgctgctcaaccagatagaggaagccgggtttgaatggcagatccctggcctgcgt
cgcgagctgattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtc
ccggctcccaactatgcggaagcgtttcttggccgggcggcgccgcttgagctgccgctg
ctcgattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcc
tggcagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaa
aacaagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaa
gtgcaggagacgctgtcggcggtcgctgatgacggtattgagcagagcgggctgcatatc
tggagctttggcaccctggcggaaagttacgaacagaagcgcggtaactataaggtgaaa
gcctggccggcgctggtggacgagcgcgacagcgtggccatcaaactgtttgataatcca
caggaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccg
tcgccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctacttt
aacccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggcgttgataag
cttattgacgaggcgggcggtccggtgtggacggaagagggctttagtcagctgcacgat
aaagtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatc
ctcaccgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcg
ctggggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcacc
ggcaacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgt
ctggagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagc
gtgcagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgac
gatgtccgggagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcag
ctgggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacc
ccatag
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