Klebsiella pneumoniae subsp. pneumoniae HS11286: KPHS_35300
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Entry
KPHS_35300 CDS
T01733
Name
(RefSeq) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
kpm
Klebsiella pneumoniae subsp. pneumoniae HS11286
Pathway
kpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KPHS_35300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpm03400
]
KPHS_35300
Enzymes [BR:
kpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
KPHS_35300
DNA repair and recombination proteins [BR:
kpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KPHS_35300
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPHS_35300
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KPHS_35300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-GeneID:
11848561
NCBI-ProteinID:
YP_005227830
UniProt:
A0A0H3GSG0
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All DBs
Position
3528628..3530052
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AA seq
474 aa
AA seq
DB search
MQDSVNQPGFLFHDYETFGTSPSLDRPAQFAAIRTDAELNVLGEPEVFYCKPADDYLPQP
QAVMITGITPQEALAKGDNEAAFARRIHDLFTVPQTCIVGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANGIEHQNAH
DAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSGMFGAARG
NTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLPAAPIKLV
HLNKCPVLAQANTLRPQDADRLGISIQRCLENAQLLRANPQVREKVVAVYAEAEPFVPSE
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNYRARNFPGTLDE
HEQQRWLEHRRQVFTPAFLQAYADELQMLYQQYADDKEKLAQLKALWQYAQDIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcgtcaaccagcccggatttttattccacgattatgaaaccttcggcacc
agcccttccctcgaccggccggcgcagttcgccgccatccgcaccgacgcggagctgaat
gtgctcggcgagcccgaagtgttttactgcaaacccgctgacgattacctgccgcagccg
caggcggtgatgatcaccgggatcacgccgcaggaagcgctggccaaaggggataatgag
gccgcgtttgcccgccgcatccacgatctgttcacggtgccgcaaacctgtatcgtcggc
tataacaacgtgcgctttgatgacgaagtgacgcggaatatcttctatcgcaacttctat
gacccttatgcctggagctggcagcacgataactcgcgctgggatctgctcgacgtgatg
cgcgcctgctatgccctgcgtccggaagggatcgcctggccggagaatgacgaagggttg
ccgagcttccggcttgaacatctgaccgtcgccaacggtattgaacaccagaacgcccat
gacgcgatggccgatgtgtacgccaccatcgccatggcgaagctggtgaaaacccggcag
ccgcggctgtttgattatctctacagccaccgcaataagcgcaagctggcgacgctcatc
gacgtgccgcagatgaaacccctggtgcatgtctccggcatgtttggcgcagcgcgcggc
aacaccagcctggtggcgcccctggcctggcatccggaaaaccgcaatgcggtgattatg
gtcgatctggcgggcgatatggcgccgctgctggagctcgatgccgatgccttgcgcgag
cggctttacaccccgcgcgccgagcttggcgatctgccggcggcgccgatcaagctggtg
catctcaataaatgtccggtgctggcccaggccaataccctgcgcccgcaggatgccgac
cggctggggatctccattcagcgctgtctggagaacgcccagctgctgcgggcgaatccg
caggtgcgcgagaaggtagtggcggtctatgccgaagccgaacccttcgtgccgtccgaa
aacgtcgacgcccagctttacaatgggttctttagcgatgccgaccgcgcggcgatgaaa
atcgtgctggaaaccgaaccgcgcaatctgccggcgctggatatcaccttcgccgaccag
cgtatcgaacgcctgctgtttaactaccgggcgcgcaacttccccggcacgctcgatgaa
catgagcagcagcgctggttagagcaccgtcgtcaggtgtttacgccggcttttttgcag
gcctatgccgatgagctgcagatgctgtatcagcagtatgcggatgataaagagaagctg
gcgcagctgaaggcgctgtggcaatacgcacaggatattgtctga
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