Klebsiella pneumoniae subsp. pneumoniae HS11286: KPHS_42920
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Entry
KPHS_42920 CDS
T01733
Name
(RefSeq) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kpm
Klebsiella pneumoniae subsp. pneumoniae HS11286
Pathway
kpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KPHS_42920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpm03400
]
KPHS_42920
Enzymes [BR:
kpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KPHS_42920
DNA repair and recombination proteins [BR:
kpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPHS_42920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
Ig_mannosidase
Motif
Other DBs
NCBI-GeneID:
11849343
NCBI-ProteinID:
YP_005228592
UniProt:
A0A0H3GSM0
LinkDB
All DBs
Position
complement(4322523..4326011)
Genome browser
AA seq
1162 aa
AA seq
DB search
MTDTAESLDPLRLPLIGERLIEASAGTGKTFTIAALYLRLLLGLGGEAAYPRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIADKDDAAKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPNETLAERHQQIIARIDSLKQQWREQV
GEIEGVLENSGLDRRKFNRGNQGKWMEKVNAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGETLASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRRQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFHEIPFLPVKA
AAKNKGLRFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQRGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSEYRQIWRQRGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLAARLADFCHGDIALQIPGELDLTPWQAPAATIPRLSARELQRRIADDWRV
TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPEGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGPDIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGRGGGAGDLHHPAGATAD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctgagtctttggatcccctgcgcttgcccctgatcggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctgtatctgcggctg
ctgttggggctgggcggtgaggccgcctatccccgcgccatcagcgttgaagaactgctg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcggccgtatccgcagcaacatc
cacgaactgcgcatcgcctgcctgcgcggcgaatccgacaatccgctctacagcgcgttg
ttggcggagatcgccgataaagacgacgccgcgaagacgctgctgctggctgaacggcag
atggacgaggcggcggtattcaccatccacggcttttgccaacggatgctgagccttaac
gccttcgagtcgggcatgctgttcgagcaacagctgatcgaggatgaatcccgcctgcgc
tatcaggcctgcgccgatttctggcgccgccactgctatcccctgacccgcgatatcgcg
gcggtgatccacgacgtctggaaagggccgcgcgatctgctgaagtcccttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccagcccctaacgagacgctggccgaa
cgccatcagcagatcatcgcccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaggcgtgctggaaaattccggccttgaccggcggaagtttaatcgcggc
aaccagggcaagtggatggagaaagtgaacgcctgggcgcaggaagagacgttaagctac
caactgcccgacgcgctggagaaatttgcccagtcgtttctgctcgagcgcaccaaagcc
ggtggcgaaccgccggtgcatcccctgtttagcgccgtagagtcgttgctggcctcctcg
ctgacgctcaccgatctggtgctggcgagagcgatggtcgagatccgcgatgcggtcgcc
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgagacgctggccagcgccattcgccagcgttttccggtg
gcgatgatcgatgaatttcaggacaccgaccctcagcagtaccggatttttcgccgcatc
tggcgccggcagccggagacggctctgctgctgatcggcgatcccaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tacaccctcgataccaactggcgctcctcgccgggcatggtgggcagcgtcaatcggctg
ttcagcctcagcgataaccccttcatgttccacgagatcccgttcctgccggtgaaggcg
gcggcgaagaacaaggggctgcgctttaccgttgacgcggcggacgtaccggcgatgaac
gtctggctgatgcccggcgacactgtcgggtctggcgattatcagacctttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccggtcagcgggggcgcgcgctgctg
tggcgcggggaaacctcgcgcccggtacaggcttcggatattaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcattccctcagtctac
ctctccaaccgcgacagcgtttttgagacgcttgaggcccaggagctgctctggctattg
caggcggtgctggccccggagcgggaaaataccctgcgcagcgcgctggcgacgtcgatg
tttggcctgaccgcgctggatattgaaaacctgaaccaggatgagcaggcgtgggacgcg
ctggtggaagagtttagcgaataccgccagatttggcggcagcgcggagtgatgccgatg
ctgcgggcgttgatgacagcccgacatatagccgagaatctactggcgacacgcggcggc
gagcggcgcttaaccgacattctgcacatcagcgaactgctgcaggaggcggccagccag
ctggaaagcgagcatgccctggtgcgctggctggcgcagcatatcgccgagccggacagc
aacgccgccagccagcagatgcgtctcgaaagcgataagcacctggtgcaaattgtcacc
attcacaagtcaaaagggctggaataccccctggtctggctgccgtttatcgcccggttt
cgtaaacaggaccaggcgttttaccacgatcgcgagacgttcgcggcggtgctggatctg
ggccaggatgaggccagcctcgagctggcggaggcggaacgactggcggaagatctgcgc
ctgctgtacgtggccctgacccgcgcggtctggcactgcagcctcggcgtggcgccgctc
agcagccggaaatccggcaacagcgatttccacctcagcgcgctgggacggctgctgcag
gcgggcgaagccatggacgccgccgggctggctgcgcggctggcggacttctgtcatggc
gatattgcattacagattccgggcgaactggatctcaccccgtggcaggcgcccgcggcg
accatcccgcgattgtcggcgcgcgagctgcagcgccgcatcgccgacgactggcgggtg
accagttactccggactgcagcagcatggtttcagcggcgggcaggatttgctgccgcgt
ctggatgttgatgccgccggcgtcggcgaagtcgtggaagagccgcagctgactccgcac
cagttcccgcgcggcgccgcgccggggaccttcctgcacagcctgtttgaggagctggac
ttcacccagccggtgccggaagggtggatggcggagaagctgcagctgagcgggtttgac
gcgcagtgggcgccggtgctgaccgactggctggggggcgtgctgaagacccgcctgccg
gggccggatatcgcgctcaatcagcttgcggcgcgggataaacaggtggagatggcattt
tacctgcccatcgcccagctgctgacggcggagcgccttgacgcgcttatccgccagtac
gatcccctctctgccgacacgccgccgctggatttccgccaggtgcgcggcatgctgaag
ggctttatcgatctggtcttccgtcacgaaggccgttattacctgctggattacaaatcc
aactggctgggggaagatcgcgaggcctacacccggccggcgatggagcaggcgatgcgt
gcccaccgctacgatctacagtatcagctgtatagcctggcgctgcaccgctatctgcgc
caccggctggccgattatgactatgaccgccacttcggcggcgtgatttatcttttcctg
cgcggcatggacgggcgaggagggggggcaggggatcttcaccacccggccggtgcgacc
gctgattga
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