Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52): KPN_00939
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Entry
KPN_00939 CDS
T00566
Symbol
himD
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
kpn
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Brite
KEGG Orthology (KO) [BR:
kpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpn03032
]
KPN_00939 (himD)
03036 Chromosome and associated proteins [BR:
kpn03036
]
KPN_00939 (himD)
03400 DNA repair and recombination proteins [BR:
kpn03400
]
KPN_00939 (himD)
DNA replication proteins [BR:
kpn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KPN_00939 (himD)
Chromosome and associated proteins [BR:
kpn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KPN_00939 (himD)
DNA repair and recombination proteins [BR:
kpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KPN_00939 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
ABR76375
UniProt:
A6T704
LinkDB
All DBs
Position
1058249..1058536
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AA seq
95 aa
AA seq
DB search
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYEG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgccagccagcaatctcacattccggcgaaa
gcggtggaagatgctgttaaagaaatgctggaacatatggcctcaacgcttgctcaaggt
gagcgcattgaaatccgcggtttcggcagcttttctctgcactatcgagcacctcgcacc
ggacgtaacccgaaaactggtgataaagtcgaactggaaggtaagtacgttccgcacttt
aagcccgggaaagaattacgtgaccgcgccaatatttatgaagggtga
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