Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52): KPN_01484
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Entry
KPN_01484 CDS
T00566
Symbol
hrpA
Name
(GenBank) helicase, ATP-dependent
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpn
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Brite
KEGG Orthology (KO) [BR:
kpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpn03019
]
KPN_01484 (hrpA)
Enzymes [BR:
kpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPN_01484 (hrpA)
Messenger RNA biogenesis [BR:
kpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPN_01484 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_19
AAA_22
nSTAND3
T2SSE
nSTAND_NTPase5
NACHT
DUF6145
ResIII
PhoH
SLFN-g3_helicase
AAA_16
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABR76916
UniProt:
A6T8J5
LinkDB
All DBs
Position
1645888..1649790
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERSQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRAAPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGALAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggttagc
cagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggtaaaaccacccagttgcccaaaatctgcatggagctggggcgcggg
ctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgccaat
cgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgcttc
agcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatcctgctggcg
gagatccagcaggatcgtctgttgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagcctgaatattgactttctgctcggctatctgaaagagctcctgccgcgccgc
ccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatctttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggtgag
cgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
ggacgacgcatcgtgctggcgaccaacgtggcggaaacctcgctcaccgtgccgggcatt
aagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatatccaggacggcgtacgcctgctggaagagctgggcgccatcaccaccgatgcgcag
gcaacggcttataagctaaccccgctgggccgccagctcagccagctaccggtggatccg
cgtctggcgcggatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacaccgccgcttccacgataaagagtccgattttctcgccttcgtcaat
ctgtggaactacctcggcgagcagcagaaggcgctgtcgtcgaatcagttccgccgccag
tgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggacatctacacccag
ctgcgccaggtggtgaaagagctcggcctgccgatcaacagtgagccggcggaatatcgc
gagatccatactgcgctgctgaccggtctgctgtcgcacatcggcatgaaggatgccgat
aagcaggagtttaccggcgcgcgcaacgcccgcttctctattttcccgggttccggcctg
tttaaaaagccgccgaagtggacgatggtggccgagctggtcgagaccagccgcctgtgg
ggccgcatcgccgcgcgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcatacagtgagccgcactgggagcggtcgcagggcgcggtaatggcgacggaa
aaggtcaccgtctacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccagatc
gacccggcgctgtgccgcgaactgtttatccgccatgcgctggtggagggcgactggcag
acgcgtcacgccttcttccgcgaaaacctgaagctgcgggcggaaatcgaagagctggag
cataagtcgcgccgccgcgacatcctggtggatgacgagacgctgttcgagttctacgac
cagcgcataagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgggcc
agccgtgaaaccccggatctgctcaattttgaaaagagcatgctgattaaagagggggcg
gagcaggtcagtaaactggactacccgaacttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaacctggcgctgacgccgacggcgtgacggtgcatattccgctg
ccgctgctgaaccaggtagaggaagccgggtttgaatggcagatccctggcctgcgtcgc
gagctcattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttcttggccgggcggcgccgctcgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaagtg
caggagacgctgtcggcggtcgctgatgacggtattgagcagagcgggctgcatatctgg
agctttggcgccctggcggaaagttacgaacagaagcgcggtaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagtgtggccatcaagctgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggcgttgataagctt
attgacgaagcgggcggtccggtgtggacggaagagggctttagtcagctgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctg
gagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcagctg
ggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacccca
tag
DBGET
integrated database retrieval system
