Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52): KPN_03660
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Entry
KPN_03660 CDS
T00566
Symbol
yhdA
Name
(GenBank) hypothetical protein
KO
K18765
RNase E specificity factor CsrD
Organism
kpn
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Brite
KEGG Orthology (KO) [BR:
kpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpn03019
]
KPN_03660 (yhdA)
Messenger RNA biogenesis [BR:
kpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPN_03660 (yhdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
ABR79052
UniProt:
A6TER8
LinkDB
All DBs
Position
complement(4021317..4023257)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDK
LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRPDSYRPLGSHEQFREITVPSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQKKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICSFRSGQSA
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttattacgctgctaactagcctgaccatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattgagaacaaggtcgaaaac
cgcgttcaggcggtggcgaccatgctggataaccggctcatcaccacctctttcgataag
cttgaaccgcagttggatgagctgatgacgccgatcgagatcgtgcatatcgatttcatg
ctcaacggcaaaccgctctacagccattcccgacccgatagctatcgcccgctcggcagc
catgagcaattccgtgagatcacggttccgtcgcttaaacatcctggcattacgctgcat
ctggtctacgttgacccgatggtgaactatttccgttcgctgtcgatcactgccccgctg
tcgatctccattggcttcatggtggtgattattttcttcgccgtccgctggatccgccgc
cagctggccggccaggagctgctggagctgcgttccacgcgtatcctgagcggcgagcgc
gggccgcaggtgcgcgggtcggtctatgaatggccggccagcaccagtagcgcgctggat
atgctgctgtcggagctgcagttcgccagcgatcagcgcagccggatggatacgcttatt
cgctcctacgcggcgcaggattcgaaaaccggactgaataaccgcctgttttttgacaat
cagctggccacgctgctggaagaccagaagaaggtgggagcctacggcatcgtgatgatg
atccgtctgccggagtttgatctgctacgggacaactggggacgggcggcggccgaagaa
cattactttacgcttatcaacctgctctctacctttattatgcgttaccccggcgcgctg
ttggcgcgctatcaccgtagcgacttcgccgtgctgctgccgcaccgtacgttgaaagag
gcggatagtatcgccggcctgttgctgaaggcgatggatgcgctgcctccaacgcgtatc
ctcgatcgcgacgatatgatgcatatcggcatctgttctttccgcagcgggcaatcggcg
gcgcaggtgatggaacatgcggaagcggcgacgcgcaacgcggtgctgcagggcagcaac
agctggtcggtctatgatgacacccttccggagaaaggtcgcggcaacgttcgctggcga
acgctgatcgaacagatgctgagccgcggcgggccgcggttgtaccaaaaaccagctgtc
acccgcgacgggcgggtacatcatcgtgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgattgcagcggaatacatgccgatggtgctgcagtttggcctggcggaggagtat
gaccgcctgcaggtaacgcgcctgctgccgtttttaggcttctggcccgaggagaatctg
gcgctccaactgtcggtggagtcgctgatccgtccgcgtttccagcgctggctgcgcgat
gccttgatgcagtgtgaaaaatcgcagcgtcagcggattatttttgaacttgcagaggca
gatgtttgtcaatatatcggccgtctgcagccggttatgcgattggttaacgctctgggc
gttcgggtggcagtggttcaggcggggttaaccctggttggaaccagctggatcaagcag
ctggatgcggagctgatcaaactgcatccgggtctggcgcgcaacatcgaaaagcgcagc
gagaaccaactgctggtgcaaagcctggtggaagcctgtaaaggcatgcctatgcaagtt
tttgcgacgggcgtacgcagccgcagcgagtggttggtactgtcccaatgcggtgtcacg
ggcgggcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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