Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52): KPN_04366
Help
Entry
KPN_04366 CDS
T00566
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kpn
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Pathway
kpn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPN_04366 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpn03021
]
KPN_04366 (rpoC)
03400 DNA repair and recombination proteins [BR:
kpn03400
]
KPN_04366 (rpoC)
Enzymes [BR:
kpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPN_04366 (rpoC)
Transcription machinery [BR:
kpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPN_04366 (rpoC)
DNA repair and recombination proteins [BR:
kpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPN_04366 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABR79725
UniProt:
A6TGP1
LinkDB
All DBs
Position
4774182..4778405
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLRNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDSVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDDNGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHLINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaagcctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagattatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcatgtccgactgcgcacatctggttcctgaaatccctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgcgatatcgaacgtgtactgtac
tttgaatcctatgtggttatcgaaggtggcatgaccaacctcgaacgcaaccagattctg
acggaagaacagtacctggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggcgcggaagcgatccaggcgctgctgcgcaatatggatctggagcaggaatgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
attaagctgctggaagctttcgttcagtctggcaacaagccggagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgctggttccgctggacggtggtcgtttc
gcgacgtctgacctcaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgccag
aacctgctcggtaaacgcgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaagatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtcctgctgaaccgtgcgccaaccctgcaccgtctgggtattcaggcattcgaaccggtt
ctgatcgaaggtaaagccatccagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgacagtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgccggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagacgacaat
ggtgagtttgtcgcgaaaaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgccgttctctatcgtgaaccaggcgcttggtaagaaagcg
atctccaagatgctgaacacctgttaccgtattctgggtctgaaaccgaccgttattttt
gcggaccagacgatgtacaccggctttgcttacgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgaaatcatcagcgaagcggaagcggaa
gttgctgagattcaggaacagttccagtccggtctggtgaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggtcaggaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gctggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacccacggtgctcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttacctgactcgtcgtctg
gttgacgttgcgcaggacctggtcgtcactgaagacgactgcggcaccctggaaggcatc
accatgacgccggttatcgaaggtggcgacgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgtgactgcggaagatgttctgaagccgggtaccgcggatattctggttccacgc
aacacgctgctgcatgagcactggtgtgacctgctggaagcgaactccgttgactccgtc
aaagtgcgttccgttgtatcctgtgacaccgactttggcgtctgcgcgcactgctatggt
cgtgacctggcgcgtggccacctcatcaacaaaggtgaggctatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtcggttgtgaactccagtggtaagctggttatcacttcccgtaatacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtaccttacggt
gcggttatggcgaaaggcgacggtgagcaggttgccggcggtgaaaccgtcgcaaactgg
gatccgcacaccatgccggttatcaccgaagttagcggtttcatccgtttcactgacatg
atcgacggtcagaccattactcgtcagactgacgagctgaccggtctgtcttcgctggtg
gttctggactctgcagaacgtaccgcaggtggtaaagatctgcgtccagcactgaaaatt
gttgatgctcagggcaacgacgttctgatcccaggcactgatatgcctgctcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctcgggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggatatcaccggtggtctgccgcgc
gttgcggacctgttcgaagcacgtcgtccgaaagagccggctatcctggctgaaatcagc
ggtatcatttccttcggtaaagaaaccaaagggaaacgtcgcctggttatcaccccggta
gacggtagcgagccgtacgaagagatgatcccgaaatggcgtcagctcaacgtgttcgaa
ggtgaacgtgtggaacgtggtgatgtggtttccgacggtccggaagcaccgcacgacatt
ctgcgtctgcgtggcgtacatgctgtgacccgttacattgttaacgaagtccaggacgta
taccgtctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgaaagcgcaggcagctccgacttcctcgaaggcgagcaggtg
gaatactcccgcgtcaagatcgcgaaccgcgaactggaagcgaacggcaaagtgggcgca
acgttctcccgcgatctgctgggtatcaccaaagcgtctctggccaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggccggt
accggttatgcgtatcaccaggatcgtatgcgccgtcgcgctgctggcgagctgccggcg
gcaccgcaggtgagcgtggaagaagcgtctgccaacctggcagagctgctgaacgcaggt
ctgggcggttctgacaacgattaa
DBGET
integrated database retrieval system
