Klebsiella pneumoniae 32192: KU54_025865
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Entry
KU54_025865 CDS
T03746
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kpne
Klebsiella pneumoniae 32192
Pathway
kpne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KU54_025865 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpne03021
]
KU54_025865 (rho)
03019 Messenger RNA biogenesis [BR:
kpne03019
]
KU54_025865 (rho)
Transcription machinery [BR:
kpne03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KU54_025865 (rho)
Messenger RNA biogenesis [BR:
kpne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KU54_025865 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AJB60026
UniProt:
A0A085DEY6
LinkDB
All DBs
Position
5117688..5118947
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaagatatctttggcgacggcgtactggagatactgcaggat
ggatttggattcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgctcgc
gtactggatctggcctccccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaggccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcatacaaccacccg
gactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggcatcccgtcacgtg
caggttgccgagatggttattgagaaagcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactctattacccgtctggcgcgtgcctacaacaccgtggttccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgtttc
tttggtgcggcacgtaacgtcgaggagggcggtagcctgaccatcatcgccacggcgctg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatggaattcctcatc
aataagctggcaatgaccaagacgaatgatgacttcttcgatatgatgaagcgctcgtaa
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