Klebsiella pneumoniae Kp52.145: BN49_0547
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Entry
BN49_0547 CDS
T05281
Symbol
deaD
Name
(GenBank) highly similar to cold-shock DEAD box protein A from Klebsiella pneumoniae (sp|P33906)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Pathway
kpnk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN49_0547 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpnk03019
]
BN49_0547 (deaD)
03009 Ribosome biogenesis [BR:
kpnk03009
]
BN49_0547 (deaD)
Enzymes [BR:
kpnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN49_0547 (deaD)
Messenger RNA biogenesis [BR:
kpnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN49_0547 (deaD)
Ribosome biogenesis [BR:
kpnk03009
]
Prokaryotic type
rRNA helicases
BN49_0547 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDO12308
UniProt:
A0AB74QPQ7
LinkDB
All DBs
Position
571707..573623
Genome browser
AA seq
638 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPRREFRDRDDRFDRRGDRNDRGPRGDREDRPKR
ERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRGFGGERREGGRGFGGERR
EGRRFSGERREGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcg
ctcaccgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctggacggccgcgacgttctgggtatggcccagaccggtagcggtaaaaccgcagcattc
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgagctggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtgaacgtggttgccctgtacggcggtcagcgttatgacgtgcagctgcgc
gccctgcgtcagggtccgcagatcgtcgtcggtaccccgggtcgtctgctggaccacctg
aagcgcggcaccctggacctctccaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgcatgggctttatcgaagacgtagaaaccattatggcgcagatcccggaaggg
catcagaccgcgctgttctccgccaccatgccggaagctatccgtcgcattacccgtcgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgacgactcgcccggatatc
agccagagctactggactgcctacggcatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgtccgtaccaaaaacgcgaccctggaa
gtagctgaagcgctggagcgtaatggctacaacagcgcggcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggaacgcctgaaagatggtcgtctggatatcctgatt
gcgactgacgttgcggcccgtggcttggacgttgagcgtatcagcctggtggtgaactac
gacatcccaatggattctgaatcctacgttcaccgtatcggccgtactggtcgtgccggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcaccatgaagctgaccattcctgaagtggaactgcctaacgcggagctgctgagc
aagcgtcgtctggaaaaattcgccgcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcactgctggcgaaaatccagccgacggcggaaggtgaagagctggac
gtggaaacgctggctgctgcgctgctgaagatggctcagggcgaacgttcgctgatcgtt
ccgccggacgcgccgatgcgtccacgtcgtgaattccgcgatcgtgacgatcgtttcgac
cgtcgtggcgaccgtaatgatcgcggcccgcgcggcgatcgcgaagatcgtccgaagcgt
gagcgtcgtgacgtgggtgacatggagctgtatcgcattgaagtgggtcgcgatgacggc
gttgaagtgcgtcatatcgttggcgcgatcgccaatgaaggcgatatcagcagccgttac
atcggtaacatcaagctgttcgcttctcactccaccattgagctgccgaaagggatgccg
ggcgaagtgctgcagcactttactcgtacccgtatcctgaacaagccgatgaacatgcag
ctgctgggcgatgcgcagccgcgcaccgaacgtcgtggcggcggtgagcgtcgcgaaggc
ggccgtggctttggcggcgagcgtcgtgaaggcggccgtggcttcggtggcgaacgtcgt
gaaggacgtcgtttcagcggcgaacgtcgtgaaggccgtgcgccgcgtcgtgacgatgca
tccgcgccgcgccgcgatgactcagccggtcgccgtcgcttcggtggcgatgcgtaa
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