Klebsiella pneumoniae Kp52.145: BN49_0632
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Entry
BN49_0632 CDS
T05281
Symbol
rpoD
Name
(GenBank) highly similar to RNA polymerase sigma factor from Escherichia coli O157:H7 (tr|Q8XAN5)
KO
K03086
RNA polymerase primary sigma factor
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Pathway
kpnk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN49_0632 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpnk03021
]
BN49_0632 (rpoD)
Transcription machinery [BR:
kpnk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN49_0632 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
CDO12393
UniProt:
W9B3D4
LinkDB
All DBs
Position
complement(655126..656967)
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AA seq
613 aa
AA seq
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MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATH
VGSELSQEEMDDDEDEDEDEDADDNSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR
SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRSMMDRVRTQERIIMKLCVEQCKMPKK
NFITLFTGNETSETWFNAAVAMNKPWSEKLLEVKEDVQRGLQKLQQIEEETGLTIEQVKD
INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP
EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL
RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattccgatcag
atcgaagacatcatccaaatgatcaacgacatgggtattcaggtgatggaagaagcaccg
gatgccgatgatctgatgcttgccgaaaacaccgcggatgaagatgctgccgaagccgcc
gcgcaggtgctctccagcgtggaatccgaaatcgggcgcacgaccgacccggtgcgtatg
tacatgcgtgaaatgggtaccgtagagctgctgacccgtgaaggcgaaattgacatcgcc
aaacgcatcgaagacggcatcaatcaggtgcagtgctccgttgccgaatatccggaagcg
atcacctacctgcttgagcagtacgaccgcgttgaagcggaagaagcccgtctgtccgat
ctgatcaccggtttcgtcgatccgaacgccgaagaagatatggcgccaaccgccacccac
gttggctccgagctgtctcaggaagagatggatgacgacgaagacgaagacgaagatgaa
gacgccgacgacaacagcgatgacgacaacagcatcgacccagagctggcccgtgagaaa
ttcgccgagctgcgtacccagtacgaactgacgcgcgacaccatcaaagccaaaggtcgt
agccatgccgccgcccaggaagagatcctgaagctgtctgaagtcttcaagcagttccgc
ctggtgccgaagcagttcgattacctggtcaacagcatgcgcagcatgatggatcgcgtt
cgtactcaggaacgtatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaagaaa
aacttcatcaccctgttcaccggcaacgaaaccagcgagacctggttcaacgccgcggtg
gcaatgaacaagccgtggtctgagaagctgctggaagtgaaagaagatgtgcagcgcggc
ctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggttaaagat
atcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatggtt
gaagcgaacctgcgtctggttatctctatcgccaagaaatacaccaaccgcggtctgcag
ttcctcgacctgattcaggaaggcaacatcggtctgatgaaagcggtcgataagttcgaa
taccgtcgcggctacaagttctcgacctacgccacctggtggatccgtcaggccatcacc
cgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagactatc
aacaagctcaaccgtatctcccgtcagatgctgcaggagatgggccgtgaaccgaccccg
gaagagctggctgagcgtatgctgatgccggaagacaaaatccgtaaagtgctgaagatc
gccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctgggg
gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgagagcctg
cgcgcggcaacgcatgacgtgctggccggcctcaccgctcgtgaagcgaaagtgctgcgt
atgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacagttc
gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactgcgccac
ccgagccgttctgaagtgctgcgtagcttcctcgacgattaa
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