Klebsiella pneumoniae Kp52.145: BN49_3686
Help
Entry
BN49_3686 CDS
T05281
Symbol
sbcB
Name
(GenBank) highly similar to exodeoxyribonuclease I from Escherichia coli strain K12 (sp|P04995)
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Pathway
kpnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BN49_3686 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpnk03400
]
BN49_3686 (sbcB)
Enzymes [BR:
kpnk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BN49_3686 (sbcB)
DNA repair and recombination proteins [BR:
kpnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BN49_3686 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN49_3686 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN49_3686 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CDO15438
LinkDB
All DBs
Position
3863631..3865055
Genome browser
AA seq
474 aa
AA seq
DB search
MQDSVNQPGFLFHDYETFGTSPSLDRPAQFAAIRTDAELNVLGEPEVFYCKPADDYLPQP
QAVMITGITPQEALAKGDNEATFARRIHDLFTVPQTCIVGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANGIEHQNAH
DAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSGMFGAARG
NTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLLAAPIKLV
HLNKCPVLAQANTLRPQDADRLGISIQRCLENAQLLRANPQVREKVVAVYAEAEPFVPSE
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNYRARNFPGTLDE
HEQQRWLEHRRQVFTPEFLQAYADELQMLYQQYADDKEKLAQLKALWQYAQDIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcgtcaaccagcccggatttttattccacgattatgaaaccttcggcacc
agcccttccctcgaccggccggcgcagttcgccgccatccgcaccgacgcggagctgaat
gtgctcggcgagcccgaagtgttttactgcaaacccgctgacgattacctgccgcagccg
caggcggtgatgatcaccgggatcaccccgcaggaagcgctggccaaaggggataatgag
gccacatttgcccgccgcatccacgatctgttcacggtgccgcaaacctgtatcgtcggc
tataacaacgtgcgctttgatgacgaagtgacgcggaatatcttctatcgcaacttctat
gacccttatgcctggagctggcagcacgataactcgcgctgggatctgctcgacgtgatg
cgcgcctgctatgccctgcgtccggaagggatcgcctggccggagaatgacgaagggttg
ccgagcttccggcttgaacatctgaccgtcgccaacggtattgaacaccagaacgcccat
gacgcgatggccgacgtatacgccaccatcgccatggcgaaactggtgaaaacccggcag
ccgcggctgtttgattatctctacagccaccgcaataagcgcaagctggcgacgcttatc
gacgtgccgcagatgaagcccctggtgcatgtctccggcatgtttggcgcagcgcgcggc
aacaccagcctggtggcgcccctggcctggcatccggaaaaccgcaatgcggtgattatg
gtcgatctggcgggcgatatggcgccgctgctggagctcgatgccgatgccttgcgcgag
cggctttacaccccgcgcgccgagcttggcgatctgctggcggcgccgatcaagctggtg
catctcaataaatgtccggtgctggctcaggccaataccctgcgcccgcaggatgccgac
cggctggggatctccattcagcgctgtctggagaatgcccagctgctgcgggcgaatccg
caggtgcgggagaaagtggtggcggtctatgccgaagccgagccgttcgtgccgtccgaa
aacgtcgacgcccagctttacaatgggttctttagcgatgccgaccgcgcggcgatgaaa
atcgtgctggaaaccgaaccgcgcaatctgccggcgctggatattaccttcgccgataag
cgtatcgaacgcctgctgtttaactaccgggcgcgcaacttccccggcacgctcgatgaa
catgagcagcagcgctggttagagcaccgtcgtcaggtgtttacgccagagtttttgcaa
gcctatgccgatgagctgcagatgctgtatcaacagtatgcggatgataaagagaagctg
gcgcagctgaaggcgctgtggcagtacgcacaggatattgtctga
DBGET
integrated database retrieval system
