Klebsiella pneumoniae Kp52.145: BN49_4192
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Entry
BN49_4192 CDS
T05281
Symbol
hrpB
Name
(GenBank) highly similar to ATP-dependent helicase HrpB from Escherichia coli B354 (tr|D6J609)
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpnk03019
]
BN49_4192 (hrpB)
Enzymes [BR:
kpnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BN49_4192 (hrpB)
Messenger RNA biogenesis [BR:
kpnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN49_4192 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
HA2_N
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CDO15941
UniProt:
W9BBN9
LinkDB
All DBs
Position
complement(4444817..4447246)
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AA seq
809 aa
AA seq
DB search
MSSLPVAAVLPELLSALQHAPQVLLNAPTGAGKSTWLPLQILAEGNIAGRIILLEPRRLA
ARNVAQRLAELLGEKPGETVGFRMRAETCVGPQTRLEVVTEGILTRMIQRDPELTGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQRLLPEAPVVVSEGRA
YPVERRFSPLSAHQRFDEAVAVAAAELLRHEQGSMLLFLPGVGEIQRVQEQLTERVAEDV
ILCPLYGALPLSEQRKAILPAPAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDP
RTGLTRLVTQRISQASMTQRAGRAGRLSPGICLHLLGKEQAERAAAQSEPEILHSDLSAL
LLELLQWGCHVPAALAWLDQPPAVNLAAARRLLEALSALDGERLSAFGRKMAALGNEPRL
AAMLAAAQTDDEAATAAKLAAILEEPPRGGLVDLGAVFSRQQANWQQRAQQLMKRLARRG
GQPDAGLMAGLLASAFADRIARRRGQEGRYQLANGMGGMLDADDALGRHEWLIAPLLLQG
SASPDARMLLALPVEIGELIAARPELAKSSDTVEWDEAQGTLKAWRRTVIGQLVIKTQPL
AKPSEAELHQAMLNGIREKGLGVLNWTPEAEQLRLRLHCAAQWLPEEAWPAVDDASLLAS
LETWLLPQMNGVHSLRALKALDLRQALQDWLPWPLRQKLDRELPTHYTVPTGSRLAIRYH
AENPPALAVRMQEMFGEATTPVIAEGRVPLVLELLSPAQRPLQITRDLSAFWQGSYREVQ
KEMKGRYPKHVWPDDPANAAPTRRSKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggttgccgctgtccttccagaactgttatccgccctgcagcatgcg
ccgcaggttttgctcaacgcgccgaccggcgccgggaagtcgacctggctgccgctgcag
atcctcgccgagggcaacatcgcgggacgcattatcctgctcgagccgaggcgcctggcg
gcgcgtaatgtcgcgcagcggctggctgaactgcttggcgaaaagccgggggagaccgtg
ggtttccgcatgcgcgccgaaacctgcgtcggaccgcagacccgcctggaggtggttacg
gaggggatcctgacgcgcatgatccagcgcgatccggagctgacgggcgtggggctggtg
atcctcgatgagtttcacgagcgcagcctgcaggcggatctggccctggccctgctgctg
gacgtccagcaggggttacgtgacgatctcaagctgctgatcatgtcggcgaccctcgat
aacgatcgcctgcagcgtctgctgccggaggcgccggtggtggtctcggaggggcgcgct
tatccggtggagcgtcgctttagcccgctctccgcgcaccagcgttttgatgaggcggtg
gcggtagcggcggcggagctcctgcggcatgaacagggatcgatgctgctgtttctgccg
ggcgtcggcgagatccagcgcgttcaggaacagctgacggagcgcgtggcggaggatgtc
attctctgcccgctgtatggcgcgttgcccttaagcgaacagcgcaaagcgatcctcccg
gcgccggccgggaagcgcaaagtggtgctggccaccaatattgccgagaccagtttgacc
atcgaggggatccgcctggtggtcgacagcgcccaggagcgggtcgcccgctttgacccg
cgcaccggcctgacccggctggtgacgcagcgcatcagccaggcatcgatgacgcagcgt
gccggacgcgccggtcgtctctccccggggatctgcctgcatttgctcggcaaagaacag
gcggaacgggcggcggcgcagagcgagccggagatcctgcacagcgatctgtcggcgctg
ttgctggagctgctgcagtggggctgccacgttccggccgcgctggcctggctggatcag
ccgcccgcggtcaatctggccgccgcgcgccgcctgctggaggcgctgtcggcgctggac
ggcgagcggctgtcggcgtttggccgcaaaatggcagcgcttggcaacgagccgcggctg
gcggcgatgctggccgccgcacagaccgatgacgaggcggcgacagcggcaaagctggcg
gcgatcctcgaggagccgccgcgcggcggactggtggatttgggggccgtcttttcccgt
cagcaggccaactggcagcagcgagcgcagcagctgatgaagcgcctggcccgccgcggc
ggccagcccgatgccgggctaatggcggggctgctggcgtcggccttcgccgatcgcatc
gcccgccgccgcggtcaggagggtcgctaccagctggcgaacggcatgggcgggatgctg
gacgccgacgacgcgctgggccgtcatgaatggcttatcgctccgctgctgctgcagggc
agcgcttcgccggatgcccgcatgctgttggctctgccagtggaaatcggcgagctgatc
gccgcccgccctgaactggcgaaaagttccgacacggtggagtgggatgaagcgcagggg
acgctgaaagcctggcggcggacggtgatcggccagttggtgatcaagacccagccgctg
gcgaaaccctctgaggcagagctgcatcaggcgatgctcaacggtattcgtgagaaaggc
ctcggggtgctcaactggacgccagaggctgagcagctgcgcctgcggctgcactgtgcg
gcgcagtggctgccggaagaggcatggcccgcagtggatgacgcttcgctgctggcctcg
ctggagacatggctgctgccgcagatgaacggcgttcattccctgcgggcgctgaaggcg
ctggatctgcgtcaggcgctacaggactggctgccatggccgctgcgccagaagctggat
cgcgagctgccgacgcactataccgtgccgaccggcagccgcctggcgatccgataccat
gcggagaacccgccagcgctggcggtgcgtatgcaggagatgttcggcgaggccacgacg
ccggtgatcgccgaggggcgggtgccgctggtgctggagctgctgtcgcctgcccagcgt
ccgctgcagatcacccgcgatctgagcgccttctggcaagggagctaccgcgaggtgcag
aaagagatgaagggacgctatccgaagcacgtctggccggacgatccggccaacgccgcc
ccgacccgccgcagcaaaaaatactcgtag
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