Klebsiella pneumoniae Kp52.145: BN49_4475
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Entry
BN49_4475 CDS
T05281
Symbol
rpoB
Name
(GenBank) highly similar to DNA-directed RNA polymerase subunit beta from Klebsiella pneumoniae subsp. pneumoniae strain ATCC 700721 - MGH 78578 (sp|A6TGP0)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpnk
Klebsiella pneumoniae Kp52.145
Pathway
kpnk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpnk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN49_4475 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpnk03021
]
BN49_4475 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpnk03400
]
BN49_4475 (rpoB)
Enzymes [BR:
kpnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN49_4475 (rpoB)
Transcription machinery [BR:
kpnk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN49_4475 (rpoB)
DNA repair and recombination proteins [BR:
kpnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN49_4475 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
CDO16218
LinkDB
All DBs
Position
complement(4760068..4764096)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LIPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTNGVVT
DEIHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKESEIKELLQ
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggatgtgccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtatggtctggaagctgctttccgttccgtattcccgattcag
agctacagcggtaattccgagctgcaatacgtcagctaccgtctgggcgaaccggttttt
gacgttaaagaatgtcagatccgtggcgtgacttattctgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccagaaggcaccgtcaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgaccgacaacggtacctttgttatcaacggt
accgagcgtgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgacagtgac
aaaggtaagacccactcctccggtaaggttctgtataacgcacgtatcatcccttaccgc
ggttcctggctggacttcgaattcgacccgaaagacaacctgttcgttcgtatcgaccgt
cgtcgtaagctgccggctaccatcatcctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgaaaaagtggtctttgaaattcgcgacaacaagctgcagatggag
ctgattccggagcgtctgcgcggtgaaactgcctccttcgatatcgaagccaacggcaaa
gtgtacgttgagaaaggccgtcgcatcacggctcgtcatatccgtcagctggaaaaagac
gatatcaagcatatcgaagtgccggttgaatatatcgcgggcaaagtggcggctaaagac
tatatcgatgaagcgactggcgaactgatctgcccggcgaacatggagttgagcctggat
ctgctggctaagctgagccagtctggccacaagcgtatcgaaacgctgttcaccaacgat
ctggaccacggcccgtacatctctgaaacggtacgcgtcgacccgactaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggcgagccgccgactcgtgaagcc
gctgaaagtctgtttgagaacctgttcttctcagaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
cttggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttccgca
gcagtgaaagagttctttggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgt
gagcgcgcaggcttcgaagttcgagacgtacacccgacccactacggtcgcgtatgtccg
atcgaaacgcctgaaggtccgaacatcggtctgattaactccctgtccgtgtacgcgcag
accaacgaatatggcttccttgagacgccgtatcgtaaagtgaccaacggtgtggttact
gacgaaattcactacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgaaaacggccacttcgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgccgtggctaaacgt
ggcggtaccgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaagtacacccgttctaac
cagaatacctgcatcaaccagatgccttgcgtgtccctgggcgaacctattgagcgcggc
gacgtgctggcagacggcccgtccaccgacctcggtgagctggcgctgggtcagaacatg
cgtgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtttccgag
cgtgttgtccaggaagaccgtttcaccactatccacattcaggaactggcgtgcgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttatatcggtgcggaagtgaccggcggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccggaagagaaa
ctgctgcgcgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccgaacggtgtctctggtaccgttatcgacgttcaggtctttacccgtgacggcgtagaa
aaagacaaacgtgctctggaaatcgaagagatgcagctgaagcaggccaaaaaagacctg
tctgaagaactgcagatcctcgaagccggtctgttcagtcgtatctacgcggtgctggtc
tccggtggcgttgaagctgagaagctcgacaagctgcctcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgtaaaatcacccaaggcgac
gatctggcaccgggcgtgctgaagattgttaaggtatatctggccgttaaacgccgtatc
cagcctggtgataagatggcgggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatccttgaaactcacctgggtatggct
gcaaaaggcatcggcgataagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgaattcatccagcgtgcttacgatctgggcgctgacgttcgccagaaagttgac
ctgaataccttcagcgatgaagaagttctgcgtctggctgaaaacctgcgtaaaggcatg
ccgatcgcaacgccggtattcgacggtgcgaaagaatctgaaatcaaagagctgctgcag
ctgggcgacctgccgacttccggtcagatcaccctgtttgatggccgcaccggtgaacag
ttcgaacgtccggtaaccgtgggttacatgtacatgctgaaactgaaccacctggtcgac
gacaaaatgcacgctcgttccaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcacagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagca
tacggcgcggcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaatcaccagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagaaattcgctcgctgggcatcaacatcgaactggaa
gacgagtaa
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