Klebsiella pneumoniae 34618: LI86_25680
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Entry
LI86_25680 CDS
T03747
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kpnu
Klebsiella pneumoniae 34618
Pathway
kpnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI86_25680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpnu03019
]
LI86_25680
03400 DNA repair and recombination proteins [BR:
kpnu03400
]
LI86_25680
Enzymes [BR:
kpnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI86_25680
Messenger RNA biogenesis [BR:
kpnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LI86_25680
DNA repair and recombination proteins [BR:
kpnu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LI86_25680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AJB78481
UniProt:
W9BQ99
LinkDB
All DBs
Position
complement(5095315..5097141)
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETALEGRDCLVVMPTGGGKSLCYQVP
ALVMGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQVRLLY
IAPERLMLDNFLEHLANWNLAMLAVDEAHCISQWGHDFRPEYAALGQLRQRMPQIPFMAL
TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGISAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKPFMALIR
AHVDGDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaggaatcgctggctaagcaggttttacaagagacc
ttcggctaccagcagttccgtcctggccaggaaacgattatcgagacggcgctcgaaggc
cgggactgcctggtggtcatgccgaccggtggcggcaagtcgctgtgctatcaggtgccg
gcgctggtcatgggcggtctgacggtcgtggtctcaccgctgatctcgctgatgaaggac
caggtcgatcagctgctggccaacggcgtggcggcggcttgtctgaactcgacgcaaagc
cgcgagcagcagcaggaggtgatggccggctgccgcagcgggcaggttcgtctgctgtat
atcgcgccggaacggctgatgctggataactttcttgagcatctggcgaactggaacctg
gcgatgctggcggtagacgaggcgcactgtatctcgcagtggggccatgacttccgtccg
gaatatgccgcgctgggccagctgcgtcagcggatgccgcagatcccgtttatggcgttg
accgccaccgccgatgataccacccgccgcgatatcgtccgcctgctggggcttaacgat
ccgctgattcaggtcagcagcttcgaccggccaaacatccgctatatgctgatggagaaa
ttcaagccgctcgaccagctgatgcgctacgttcaggatcagcgcggcaaatcgggcatt
atctactgcaacagccgttcgaaagtggaagacaccgccgccaggctgcaaagccgcggt
attagcgcggcggcttaccatgccggtctggaaaacgacgtgcgcgccgaggtgcaggag
aaattccagcgcgacgatctgcagatcgtggtggcgacggtggccttcgggatgggcatt
aacaagccgaacgtccgctttgtggtgcattttgatattccgcgcaatattgaatcctac
tatcaggagaccggccgcgccgggcgtgatggtctgccggcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagaaaaacccgccgggccgcta
caggatatcgaacggcataagctgaatgcgatgggggcgtttgccgaagcgcagacctgt
cgccgtctggtgctgctgaactattttggcgaagggcgtcaggagccgtgcggcaactgc
gatatctgtcttgacccgccaaagcagtacgatggcttaatggatgcgcgcaaggcgctt
tcaacgatttaccgggtcaatcaacgtttcgggatgggttacgtggtggaggtcctgcgc
ggggccaacaaccagcgcatccgagagatgggccacgataagctgccggtttacggtatc
ggccgggagcaaagtcacgagcactgggtgagcgtgatccgccagctgatccaccttggg
ctggtgacgcagaatatcgcccagcactccgcgctgcagctgaccgaagccgcgcgaccg
gtgctgcgtggcgaagtgccgctgcagctcgccgtgccgcgtatcgtggcgctgaagcca
aaggcgatgcagaaatcctttggcggcaattacgaccgtaaactgttcgccaagctgcgc
aaattacgtaaagcgatcgccgacgaagagaacatcccgccatatgtggtcttcaacgac
gcgacgcttatcgagatggccgaacaatcgccgctgaccgccggcgaaatgctcagcgtc
aacggcgtggggacacgcaagctcgagcgtttcgggaagccgtttatggcgctgatccgg
gcgcatgttgatggcgacgatgagtag
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