Klebsiella pneumoniae KCTC 2242: KPN2242_15405
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Entry
KPN2242_15405 CDS
T01982
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
kpo
Klebsiella pneumoniae KCTC 2242
Pathway
kpo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KPN2242_15405 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpo03400
]
KPN2242_15405 (sbcB)
Enzymes [BR:
kpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
KPN2242_15405 (sbcB)
DNA repair and recombination proteins [BR:
kpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KPN2242_15405 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPN2242_15405 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KPN2242_15405 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEJ98971
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All DBs
Position
3199797..3201221
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AA seq
474 aa
AA seq
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MQDSVNQPGFLFHDYETFGTSPSLDRPAQFAAIRTDAELNVLGEPEVFYCKPADDYLPQP
QAVMITGITPQEALAKGDNEATFARRIHDLFTVPQTCIVGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANGIEHQNAH
DAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSGMFGAARG
NTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLPAAPIKLV
HLNKCPVLAQANTLRPQDADRLGISIQRCLENAQLLRANPQVREKVVAVYAEAEPFVPSE
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADQRIERLLFNYRARNFPGTLDE
HEQQRWLEHRRQVFTPAFLQAYADELQMLYQQYADDKEKLAQLKALWQYAQDIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcgtcaaccagcccggatttttattccacgattatgaaaccttcggcacc
agcccttccctcgaccggccggcgcagttcgccgccatccgcaccgacgcggagctgaat
gtgctcggcgagcccgaagtgttttactgcaaacccgctgacgattacctgccgcagccg
caggcggtgatgatcaccgggatcacgccgcaggaagcgctggccaaaggggataatgag
gccacatttgcccgccgcatccacgatctgttcacggtgccgcaaacctgtatcgtcggc
tataacaacgtgcgctttgatgacgaagtgacgcggaatatcttctatcgcaacttctat
gacccttatgcctggagctggcagcacgataactcgcgctgggatctgctcgacgtgatg
cgcgcctgctatgccctgcgcccggaagggatcgcctggccagagaatgacgaagggttg
ccgagcttccggcttgagcatctgaccgtcgccaacggtattgaacaccagaacgcccat
gacgcgatggccgacgtatacgccaccatcgccatggcgaagctggtgaaaacccggcag
ccgcggctgtttgattatctctacagccaccgcaataagcgcaagctggcgacgcttatc
gacgtgccgcagatgaagcccctggtgcatgtctccggcatgtttggcgccgcgcgcggc
aacaccagcctggtggcgcccctggcctggcatccggaaaaccgcaatgcggtgattatg
gtcgatctggcgggcgatatggcgccgctgctggaactggatgccgatgccctgcgcgag
cggctttacaccccgcgcgccgagcttggcgatctgccggcggcgccgatcaagctggtg
catttaaataaatgtccggtactggcccaggccaataccctgcgcccgcaggatgccgac
cggctggggatctccattcagcgctgtctggagaacgcccagttgctgcgggcgaatccg
caggtgcgcgagaaggtagtggcggtctatgccgaagccgaacccttcgtgccgtccgaa
aacgtcgacgcccagctttacaatgggttctttagcgatgccgaccgcgcggcgatgaaa
atcgtgctggaaaccgaaccgcgcaatctgccggcgctggatatcaccttcgccgaccag
cgtatcgaacgcctgctgtttaactaccgggcgcgcaacttccccggcacgctcgatgaa
catgagcagcagcgctggttagagcaccgtcgtcaggtgtttacgccggcgtttttgcag
gcctatgccgatgagctgcagatgctgtatcagcagtatgcggatgataaagagaagctg
gcgcaactgaaagcgctgtggcagtacgcgcaggatattgtctga
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