Klebsiella pneumoniae KCTC 2242: KPN2242_20945
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Entry
KPN2242_20945 CDS
T01982
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kpo
Klebsiella pneumoniae KCTC 2242
Pathway
kpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPN2242_20945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpo03019
]
KPN2242_20945
03016 Transfer RNA biogenesis [BR:
kpo03016
]
KPN2242_20945
Enzymes [BR:
kpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KPN2242_20945
Messenger RNA biogenesis [BR:
kpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPN2242_20945
Transfer RNA biogenesis [BR:
kpo03016
]
Prokaryotic type
tRNA degradation factors
KPN2242_20945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AEK00069
LinkDB
All DBs
Position
complement(4402356..4404491)
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtgaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacactgcggta
ttcgttaccgttgtgggtcagaaaaaagcgaagccaggccaggactttttcccgctgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgtcgtttccgtt
aacccgcaggttaacccagacatcgtcgcgatgatcggtgcttccgctgcgctgtcgctg
tctggtattccgttcaatggcccaatcggcgctgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccaacccaggaagaactgaagtccagcaaactggacctggtggttgcc
ggtaccgaagcggccgtgctgatggtggaatccgaagcggaactgctgagcgaagaccag
atgctgggcgcggtggtcttcggccacgagcagcagcagattgttattcagaacatcaac
gacctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagcggtcaacgaa
gcgctgaacgcgcgcgtggctgcgctggctgaatcccgtctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgccacg
ctggttgctgaagatgaaaccctggacgctaacgagctgggtgaaatcctgcacgccatc
gagaaaaacgtggttcgtagccgcgtactggccggcgagccgcgtatcgatggccgtgaa
aaagatatgatccgtggtctggacgttcgtaccggcgttctgccgcgtactcacggttcc
gcgctgttcacccgtggcgaaacgcaggcgctggttaccgcgactctgggtaccgcacgc
gatgcgcagaacatcgacgaactgatgggcgagcgcaccgactccttcctgttccactac
aacttccctccgtactccgtaggcgaaactggcatggtggggtctccgaagcgtcgtgaa
atcggtcacggtcgtctggcgaagcgcggcgtactggccgtgatgccgactattgaagaa
ttcccgtacaccgtgcgcgtggtatcggaaatcaccgaatctaacggttcctcttccatg
gcttccgtctgcggcgcctctctggcgctgatggacgccggcgtgccggtaaaagccgct
gtggcgggtatcgcaatgggtctggtgaaagaaggcgacaatttcgtcgtgctgtctgac
atcctcggtgacgaagatcacctcggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgcattgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagagaccggtactaccatcgagatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggcgacaaagcgcagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgcatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgacaagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtaccggttaaggttctggaagttgac
cgccagggccgtgtccgtctgagcattaaagaagcaactgaacagactccgtctgccgca
gcgccggaagctccggctgccgagcagggcgagtaa
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