Klebsiella pneumoniae KCTC 2242: KPN2242_21330
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Entry
KPN2242_21330 CDS
T01982
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kpo
Klebsiella pneumoniae KCTC 2242
Brite
KEGG Orthology (KO) [BR:
kpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpo03019
]
KPN2242_21330
Messenger RNA biogenesis [BR:
kpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPN2242_21330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AEK00146
LinkDB
All DBs
Position
complement(4482578..4484518)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDK
LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRPDSYRPLGSHEQFREITVQSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICSFRSGQSA
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttattacgctgctaactagcctgaccatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattgagaacaaggtcgaaaac
cgcgttcaggcggtggcgaccatgctggataaccggctcatcaccacctctttcgataag
cttgaaccgcagttggatgagctgatgacgccgatcgagatcgtgcatatcgatttcatg
ctcaacggcaaaccgctctacagccattcccgacccgatagctatcgcccgctcggcagc
catgagcaattccgtgagatcacggttcagtcgcttaaacatcctggtattacgctgcat
ctggtctacgttgacccgatggtgaactatttccgttcgctgtcgatcactgccccgctg
tcgatctccattggcttcatggtggtaattattttcttcgccgtccgctggatccgccgc
cagctggccggccaggagctgctggagctgcgttccacgcgtatcctgagcggcgagcgc
gggccgcaggtgcgcgggtcggtctatgaatggccggccagcaccagtagcgcgctggat
atgctgctgtcggagctgcagttcgccagcgatcagcgcagccggatggatacgcttatt
cgctcctacgcggcgcaggattcgaaaaccggactgaataaccgcctgttttttgacaat
cagctggccacgctgctggaagaccaggagaaggtgggagcctacggcatcgtgatgatg
atccgtctgccggagtttgatctgctacgggacaactggggacgggcggcggccgaagaa
cattactttacgcttatcaacctgctctctacctttattatgcgttaccccggcgcgctg
ttggcgcgctatcaccgtagcgacttcgccgtgctgctgccgcaccgtacgttgaaagag
gcggatagtatcgccggcctgttgctgaaggcgatggatgcgctgcctccaacgcgtatc
ctcgatcgcgacgatatgatgcatatcggcatctgttctttccgcagcgggcaatcggcg
gcgcaggtgatggaacatgcggaagcggcgacgcgcaacgcggtgctgcagggcagcaac
agctggtcggtctatgatgacacccttccggagaaaggtcgcggcaacgttcgctggcga
acgctgatcgaacagatgctgagccgcggcgggccgcggttgtaccaaaaaccagctgtc
acccgcgacgggcgggtacatcatcgtgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgattgcagcggaatacatgccgatggtgctgcagtttggcctggcggaggagtat
gaccgcctgcaggtaacgcgcctgctgccgtttttaggcttctggcccgaggagaatctg
gcgctccagctgtcggtggagtcgctgatccgtccgcgtttccagcgctggctgcgcgat
gccttgatgcagtgtgaaaaatcgcagcgtcagcggattatttttgaacttgcagaggca
gatgtttgtcaatatatcggccgtctgcagccggttatgcgattggttaacgctctgggc
gttcgggtggcagtggttcaggcggggttaaccctggttggaaccagctggatcaagcag
ctggatgcggagctgatcaaactgcatccgggtctggcgcgcaacatcgaaaagcgcagc
gagaaccaactgctggtgcaaagcctggtggaagcctgtaaaggcatgcctatgcaagtt
tttgcgacgggcgtacgcagccgcagcgagtggttggtactgtcccaatgcggtgtcacg
ggcgggcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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