Klebsiella pneumoniae KCTC 2242: KPN2242_24780
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Entry
KPN2242_24780 CDS
T01982
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kpo
Klebsiella pneumoniae KCTC 2242
Pathway
kpo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KPN2242_24780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpo03021
]
KPN2242_24780
03400 DNA repair and recombination proteins [BR:
kpo03400
]
KPN2242_24780
Enzymes [BR:
kpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KPN2242_24780
Transcription machinery [BR:
kpo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KPN2242_24780
DNA repair and recombination proteins [BR:
kpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KPN2242_24780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AEK00828
LinkDB
All DBs
Position
5228556..5232779
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLRNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDSVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDDNGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHLINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagattatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcatgtccgactgcgcacatctggttcctgaaatccctg
ccgtcccgtatcggtctgctgctggatatgccgctgcgtgatatcgaacgtgtactgtac
tttgaatcctatgtggttatcgaaggtggcatgaccaacctcgaacgcaaccagattctg
acggaagaacagtacctggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggcgcggaagcgatccaggcgctgctgcgcaatatggatctggagcaggaatgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
attaagctgctggaagctttcgttcagtctggcaacaagccggagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgctggttccgctggacggtggtcgtttc
gcgacgtctgacctcaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgccag
aacctgctcggtaaacgcgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaagatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtcctgctgaaccgtgcgccaaccctgcaccgtctgggtattcaggcattcgagccggtt
ctgatcgaaggtaaagccatccagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgacagtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgccggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagacgacaat
ggtgagtttgtcgcgaaaaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgccgttctctatcgtgaaccaggcgcttggtaagaaagcg
atctccaagatgctgaacacctgttaccgtattctgggtctgaaaccgaccgttattttt
gcggaccagacgatgtacaccggctttgcttacgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgaaatcatcagcgaagcggaagcggaa
gttgctgagattcaggaacagttccagtccggtctggtgaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggtcaggaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gctggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacccacggtgctcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttacctgactcgtcgtctg
gttgacgttgcgcaggacctggtcgtcactgaagacgactgcggcaccctggaaggcatc
accatgacgccggttatcgaaggtggcgacgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgtgactgcggaagatgttctgaagccgggtaccgcggatattctggttccacgc
aacacgctgctgcatgagcactggtgtgacctgctggaagcgaactccgttgactccgtc
aaagtgcgttccgttgtatcctgtgacaccgactttggcgtctgcgcacactgctatggt
cgtgacctggcgcgtggccacctcatcaacaaaggtgaggctatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatctagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtcggttgtgaactccagtggtaagctggttatcacttcccgtaatacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtaccttacggt
gcggttatggcgaaaggcgacggtgagcaggttgccggcggtgaaaccgtcgcaaactgg
gatccgcacaccatgccggttatcaccgaagttagcggtttcatccgtttcactgacatg
atcgacggccagaccattactcgtcagactgacgagctgaccggtctgtcttcgctggtg
gttctggactctgcagaacgtaccgcaggtggtaaagatctgcgtccagcactgaaaatt
gttgatgctcagggcaacgacgttctgatcccaggcactgatatgcctgctcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctctggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggatatcaccggtggtctgccgcgc
gttgcggacctgttcgaagcacgtcgtccgaaagagccggctatcctggctgaaatcagc
ggtatcatttccttcggtaaagaaaccaaagggaaacgtcgcctggttatcaccccggta
gacggtagcgagccgtacgaagagatgatcccgaaatggcgtcagctcaacgtgttcgaa
ggtgaacgtgtggaacgtggtgatgtggtttccgacggtccggaagcaccgcacgacatt
ctgcgtctgcgtggcgtacatgctgtgacccgttacattgttaacgaagtccaggacgta
taccgtctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgaaagcgcaggcagctccgacttcctcgaaggcgagcaggtg
gaatactcccgcgtcaagatcgcgaaccgcgaactggaagcgaacggcaaagtgggcgca
actttctcccgcgatctgctgggtatcaccaaagcgtctctggccaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggccggt
accggttatgcgtatcaccaggatcgtatgcgccgtcgcgctgctggcgagctgccggcg
gcaccgcaggtgagcgtggaagaagcgtctgccaacctggcagagctgctgaacgcaggt
ctgggcggttctgacaacgattaa
DBGET
integrated database retrieval system
