Kingella potus: LVJ84_11295
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Entry
LVJ84_11295 CDS
T08248
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kpot
Kingella potus
Pathway
kpot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVJ84_11295 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpot03400
]
LVJ84_11295 (mutM)
Enzymes [BR:
kpot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LVJ84_11295 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LVJ84_11295 (mutM)
DNA repair and recombination proteins [BR:
kpot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVJ84_11295 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Zn_ribbon_3
Cas12f1-like_TNB
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
UOP00450
LinkDB
All DBs
Position
complement(1913279..1914097)
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AA seq
272 aa
AA seq
DB search
MPELPEVETTLRGIAPHIINQTVATVTIRQPKLRWQIPPELPETLRGLAVRECRRRAKYL
LIRFDTGVLLVHLGMSGSLRIWQGNAPEAGKHDHVDIVFANGTLLRYHDPRRFGAVLWLA
GAAEHHDLLKNLGVEPLSDDFTADYLFQALQKRSSPIKTVLMDNKIVVGVGNIYANESLF
QAAIAPQRAAKSLSKPECATLTAAVKQILRRAIETGGSTLRDFVNSEGKSGYFQQEYKVY
GRTNQPCPSCGTPIAKTVIGQRGTFYCPNCQR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtagaaaccaccctgcgcggcatcgcgccgcacatcatcaac
caaaccgttgccaccgtaaccatccgccagcccaaactacgctggcagattccgcccgag
ctgcctgaaaccctgcgcgggcttgcggtgcgcgaatgccgccgccgtgccaaatatctg
ctgattcgttttgatacgggcgtgctgctggttcatttgggcatgtcgggcagcctgcgg
atttggcagggcaacgcgcccgaagcaggcaaacacgaccatgtggacattgtgtttgcc
aacggcacgctattgcgctaccacgacccgcgccgttttggcgcagttttgtggctggct
ggcgcggcggagcaccatgatttgttgaaaaatctgggcgtagagccgttaagcgatgat
ttcaccgcagattacctgttccaagccctgcaaaaacgcagcagccccatcaaaaccgtg
ctgatggacaacaaaattgtggtgggcgtgggcaatatttacgccaacgaaagcctgttt
caggctgccattgccccgcagcgcgccgccaaatcgttaagcaaaccagaatgcgccacc
ttaaccgccgccgtcaaacaaatcctgcgccgcgcgattgaaacaggcggcagcaccttg
cgcgactttgtcaacagcgaaggcaaaagcggctatttccaacaggaatacaaggtgtac
ggcagaacaaaccagccctgcccaagttgcggcacgccgattgccaaaaccgtcatcggg
cagcgtggcacgttttattgcccgaattgccaacgatag
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