Kingella potus: LVJ84_12425
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Entry
LVJ84_12425 CDS
T08248
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kpot
Kingella potus
Pathway
kpot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LVJ84_12425 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpot03021
]
LVJ84_12425 (rpoA)
03400 DNA repair and recombination proteins [BR:
kpot03400
]
LVJ84_12425 (rpoA)
Enzymes [BR:
kpot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LVJ84_12425 (rpoA)
Transcription machinery [BR:
kpot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LVJ84_12425 (rpoA)
DNA repair and recombination proteins [BR:
kpot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LVJ84_12425 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UOP00607
LinkDB
All DBs
Position
complement(2089940..2090923)
Genome browser
AA seq
327 aa
AA seq
DB search
MQNSTSEFLKPRQIDVDTISNNRARVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVS
ITGVLHEYSTLDGVQEDVVDILLNLKGVIFKLHGREEVKLQLKKMGNGPVVAADITLPHD
VDVINPNHIICNLANNGSIEMEIVVEQGRGYQSVSGRRNTRNDIGIGAIQLDASFSPISR
VSFEVEPARVEQRTDLDRLVLDVETNGSLDPEEAVRSAARILIDQMSVFADLQSTPAEEV
EEKTPPIDPILLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLNE
IKEVLASKGLTLGSKLESWPPVGLERP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagcacttccgaatttttaaagccacgtcagattgatgtggatactatatct
aataatagagctcgagtatccatgcaaccgtttgagcgtggtttcggacacactttgggt
aatgctttgcgtcgtatcttgctgtcatctatgaatggttttgcgccaacagaagtctcc
atcacaggagtattgcacgaatattcgacattagatggtgttcaggaggatgttgtagat
attctcctgaatttgaaaggtgtgatatttaaactacatggtcgggaagaggttaagctt
cagttgaaaaaaatgggaaatggcccagttgttgcagctgatatcactttgccgcatgat
gttgatgttatcaatcccaatcatattatttgtaacttggcaaataatggtagtattgag
atggagattgtggtggagcaggggcgtggatatcaatctgtttcaggtcgtcgtaataca
agaaacgatattggtattggtgctatccagctagatgctagtttttcgccaattagcaga
gttagctttgaggtggagccggctcgagtagaacaaaggacggatcttgatcggttagtt
cttgatgttgaaacaaatggctcattagatcctgaagaggctgttcgtagtgccgctcgt
attttaattgatcaaatgtctgtttttgcagatttgcaaagtactcctgcggaagaggta
gaagaaaaaactcctccaattgatccgattttactacgtcctgttgatgatttagaattg
actgtaaggtcggccaattgcttgaaagctgaagatatctattatattggtgatttgata
cagcgtacagaaaccgagctgttgaagacacccaatttgggtagaaaatctctaaatgag
ataaaagaggttttagcttctaaaggattgactttgggctccaagcttgagtcttggccg
cccgtgggcttggaaaggccgtag
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