Kingella potus: LVJ84_12675
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Entry
LVJ84_12675 CDS
T08248
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kpot
Kingella potus
Pathway
kpot03030
DNA replication
kpot03430
Mismatch repair
kpot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ84_12675 (dnaE)
03430 Mismatch repair
LVJ84_12675 (dnaE)
03440 Homologous recombination
LVJ84_12675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpot03032
]
LVJ84_12675 (dnaE)
03400 DNA repair and recombination proteins [BR:
kpot03400
]
LVJ84_12675 (dnaE)
Enzymes [BR:
kpot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ84_12675 (dnaE)
DNA replication proteins [BR:
kpot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ84_12675 (dnaE)
DNA repair and recombination proteins [BR:
kpot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ84_12675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF3851
HROB
Motif
Other DBs
NCBI-ProteinID:
UOP01926
LinkDB
All DBs
Position
complement(2124919..2128347)
Genome browser
AA seq
1142 aa
AA seq
DB search
MTDPAYIPLRLHTEFSITDGMVRIKEVVKKAQEYGLPALGISDLMNEFGLVKFYKACRSA
GIKPIGAADVRIGNPESPDKPFRAMLVIRNEAGYLRLSELLTAAYVYRDRNTHIAELKPE
WLADGDNSGLICLSGAHLGEVGANLANYREDTARAAALKYAAWFPNAFYLELQRLPERPE
WETSVSGSVKLAEELGLPVVATHPAQFMSEGDFNAHEARVCIAGGWVLTDKKRPREFTGG
QFFIPPETMLERFADLPEALENSVEIAKRCNLHITLGKNFLPLFPTPDGLSLDDYLVKLS
NEGLRERMAQLYPDEAERAAKMPEYQARLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQSNRGRVIE
YVRDKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFNLCDKLSKLIPLEANKPLSLDKA
MEAEPQIQELIEAEEAGELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQDNIKNTTGDIVDVGKIPLDDQAAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGEKFA
YIHPLLESVLEPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGIPREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKLFYDDCRANGIGFLPPDINESSYRFVPCGGKQIRYALGAIKGTGEAAVE
SIIAARKSGGKFTGLLDFCERVGKEHINRRTLEALIRGGAFDSIEPNRAKLIANIDLAMD
NAEQKAANANQGGLFDMMEDAIEPVKLADTAPWSESEKLAEEKTVIGFYLSGHPFAPYEQ
EIRRFAPVSLGRLKPQESVRVAGFVTGVRTMMGKNGKFAIVLLEDRSGATKVSVSGELLE
EVRDRLKTDQILIAECRISRNDYNGGELRIRANSIMTLPQAREKFARSLALTVGPGSDIP
ALAALLESARTRSGGIPLHIRYRNGGASGELDLHGQWQITARAELFESLHTLLGDYGVSV
GW
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccgcctacatccccctgcgcctgcacaccgaattttcgattaccgacggc
atggtgcgcatcaaagaagtggtgaaaaaagcgcaggaatacggcctgcccgcgctgggc
atcagcgatttgatgaacgagtttggtttggtgaaattctacaaagcctgccgcagcgcg
ggcatcaaacccatcggtgcggcggacgtgcgcatcggcaatcccgagtcgcccgacaag
cctttccgcgcgatgctggttatccgcaacgaggcgggctatctgcgtttgagcgagctt
ttgaccgccgcttatgtctaccgcgaccgcaacacgcacattgccgaactcaagcccgaa
tggctggcagacggcgacaacagcggcctgatctgcctttcgggtgcgcatttgggcgag
gtgggcgcgaatctggcaaactaccgcgaagacacggcgcgcgcggcggctttgaaatat
gcggcttggtttccgaatgcgttttatctggaactgcaacgcctgcccgagcggccggaa
tgggaaacatcggtatcgggcagcgtaaagctggcggaagaattggggttgccggtggtg
gcgacgcatccggcgcagtttatgagcgagggcgatttcaatgcgcacgaggcacgcgta
tgcatcgccggcggctgggtactcaccgacaaaaaacgtccgcgcgaatttacaggcggc
cagtttttcatcccgcccgaaaccatgctcgaacgtttcgccgacttgcccgaagccttg
gaaaactcggtggaaatcgccaaacgctgcaatctgcacatcactttgggcaaaaacttc
ctgccgctgtttcccacgcccgacggcctgtcgctcgacgattatctggtcaaactctcc
aacgaaggcctgcgggagcgcatggcgcagctttatcccgacgaagccgaacgcgcggcg
aaaatgcccgaatatcaggcgcggctggattttgagttgaacatcatcattcagatgaag
tttccgggctatttccttatcgtacaagactttatcaactgggcgaaaacacacggctgc
cccgtcggccccggacgcggctcgggcgcaggctcgctggtggcctattccctaaaaatt
accgatctcgatcctttgaaatacgcgctgctgtttgaacgttttttaaatccggagcgc
gtgtccatgcccgacttcgacgtggatttctgccagtccaaccgcggccgcgtgattgaa
tatgtacgcgacaaatacggcgcggaagcggtaagccagattgttaccttcggcacgatg
tcgtccaaggccgtcatccgcgacgtggggcgcgtattggaactgccgttcaatttgtgc
gacaaactctccaagctgattccgctggaagccaacaagcctttaagcctcgacaaagcg
atggaagccgagccgcagattcaggaattaatcgaagccgaagaagccggcgaactcatc
acgctggcgaaaaaactcgaagacctcacgcgcggcttgggtatgcacgcgggcggcgta
ctcatcgcgccgggaaaaatctccgattacagccccgtttaccaggctgacgagtccgcc
tcgcccgtatcgatgtacgacaaaggcgacgtggaagacgtgggtttggtgaaattcgac
tttttgggcctgcgcaacctcaccatcatcgaaatggcgcaggacaacatcaaaaacacc
accggcgacatcgttgacgtgggcaaaatcccgctcgacgaccaggccgcctaccagatt
ttccgcgacgccaacaccaccgccgtattccagtttgaatccaccggcatgaaaaaaatg
ctgaaaacggcgcacaccaccaaatttgaagagctgatcgccttcgtatcgctctaccgc
cccggcccgatggacaacattcccgacttcgtcgcccgcatgaaaggcgaaaaattcgca
tacatccacccgctgctcgaatcggttctggagccgacctacggcatcatggtgtatcag
gaacaagtcatgcaggcagcgcagattatcggcggctactcgctcggcggcgcggatctg
ctgcgccgcgccatgggcaagaaaaagcccgaagaaatggtgaaacaccgcgaaatcttc
gccgaaggtgcggccaaacaaggcatcccgcgcgaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgcgctgatt
tcctatcagacggcctggctcaaagcccattatccggccgagtttatggccgccaccatg
tcgtccgaactcgacaacaccgaccagctcaaacttttttacgacgactgccgcgccaac
ggcatcgggtttctgccgcccgacatcaacgaatcgtcctaccgcttcgtcccctgcggc
ggcaaacaaatccgctacgccctcggcgcaatcaaaggcacgggcgaagccgccgtagaa
tccatcatcgccgcccgcaaatctggcgggaaattcacggggctgctcgatttttgcgaa
cgcgtcggcaaagaacacataaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccaaactcatcgccaacatcgacctggcaatggac
aacgccgaacaaaaagccgccaacgccaaccagggcggcctgttcgacatgatggaagac
gccatcgagccggtaaaacttgccgacacagccccatggagcgaatcggaaaagctggcc
gaagaaaaaaccgtcatcggcttttacctgtccggccacccgtttgccccctacgaacag
gaaatccgccgcttcgcccccgtgtccttaggccgtctgaaaccgcaagagagcgtgcgc
gtggccggtttcgttaccggcgtgcgcaccatgatggggaaaaacggcaaattcgccatc
gtcctgctcgaagaccgcagcggcgcgacgaaagtcagcgtttccggcgaactgctggaa
gaagtgcgcgaccggctcaaaaccgaccaaatccttatcgccgaatgccgcatcagccgc
aacgactacaacggcggcgaactgcgcatccgagccaacagcatcatgaccctgccgcag
gcgcgtgaaaaattcgcccgcagcctcgccctgaccgtcggccccggcagcgacatcccc
gcccttgccgccctgctcgaatccgcccgcacccgcagcggcggcatccccctgcacatc
cgctaccgcaacggcggcgcgtccggcgaactcgacctgcacggccaatggcagattacc
gcccgcgccgaactctttgaaagcctgcacaccctgctcggcgactacggcgtaagcgtc
ggctggtaa
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