Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1): A79E_2755
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Entry
A79E_2755 CDS
T02213
Name
(GenBank) ATP-dependent helicase hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpp
Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
Brite
KEGG Orthology (KO) [BR:
kpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpp03019
]
A79E_2755
Enzymes [BR:
kpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A79E_2755
Messenger RNA biogenesis [BR:
kpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A79E_2755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AFQ66050
LinkDB
All DBs
Position
complement(2908875..2912777)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERSQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRAEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRAAPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggttagc
cagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggtaaaaccacccagctgcccaaaatctgcatggagctggggcgcggg
ctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgccaat
cgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgcttc
agcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatcctgctggcg
gagatccagcaggatcgtctgttgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagtctgaatattgactttctgctcggctatctgaaagagctcctgccgcgccgc
ccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatctttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggtgag
cgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
gggcggcgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggcatt
aagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatatccaggacggcgtacgcctgctggaagagctgggcgccatcaccaccgatgagcag
gccaccgcctataagctgacgccgatgggccgccagctcagccagctgccggtggaccca
cgtctggcgcggatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacatcgccgcttccacgataaagagtccgatttcctcgccttcgtcaat
ctgtggaactacctcggcgagcagcagaaggcgctgtcgtcgaatcagttccgccgccag
tgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggacatctacacccag
ctgcgccaggtggtgaaagagcttggcctgccgatcaacagtgagccggcggaatatcgc
gagatccatactgcgttgctgaccggtctgctgtcgcacatcggcatgaaggatgccgat
aagcaggagtttaccggcgcgcgcaacgcccgcttctctattttcccgggttccggcctg
tttaaaaagccgccgaagtggacgatggttgcggagctggtcgagaccagccgcctgtgg
gggcgtattgccgcccgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcatacagtgagccgcactgggagcggtcgcagggcgcggtaatggcgacggaa
aaggtcaccgtttacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccagatc
gacccggcgctgtgccgcgaactgtttatccgccatgcgctggtggagggcgactggcag
acgcgtcacgctttcttccgcgataacctgaagctgcgggcggaaatcgaagagctggag
cataagtcgcgccgccgcgacatcctggtggatgacgagacgctgttcgagttctacgac
cagcgcatcagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgggcc
agccgtgaaaccccggatctgctcaattttgaaaagagcatgctgattaaagagggggcg
gagcaggtcagcaagctggactacccgaacttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaaccgggcgctgacgccgacggcgtgacggtgcatattccgctg
ccgctgctcaaccaggtggaggaggccggatttgaatggcagatccctggcctgcgtcgc
gagctcattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttcttggccgggcggcgccgcttgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaagtg
caggagacgctgtcggcggtcgctgatgacggtattgagcagagcgggctgcatatctgg
agctttggcaccctggcggaaagttacgaacagaagcgcggtaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtggccatcaagctgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggtgttgataagctt
atcgacgaggcgggcggtccggtgtggacggaagagggctttagtcagctgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatcctt
accgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctg
gagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgcgagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcagcta
ggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacccca
tag
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integrated database retrieval system
