Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1): A79E_3947
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Entry
A79E_3947 CDS
T02213
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kpp
Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
Brite
KEGG Orthology (KO) [BR:
kpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpp03400
]
A79E_3947
DNA repair and recombination proteins [BR:
kpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A79E_3947
Archaeal homologous recombinant proteins
A79E_3947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_15
ABC_tran
cobW
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFQ67190
LinkDB
All DBs
Position
4188889..4192026
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNKVSQSQNDLMTRDTAECLAEVEFEVKGIAYRAFWSQNRARNQPDGNLQAPRVELARCA
DGKILADKVSDKLEQTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPSDRAELLEELTGTE
IYGQISAMVYEQHKAARHALEKFEAQAAGIVLLTEAQQQALQESLQVLTDEEKALLAQQQ
SQQQQLQWLTRRDELAQQQQQAATRQQQARQALADAAPALAKLELAQPAAQLRPLWERQQ
EQTAGLAQTRQRISEVNARLLASTALRARIRQGALRAQQQRQAELADLAQWLAAHERFRL
WGQEIAGWRAQFSQLTRDKQQLTAQSTRLAALRQKLATLPASPLTLSADDVAAAIEQQTQ
SRPLRQRLISLHEQHQLLRKRLRQNADSVQQAQAEQVKLNATLTLRREQYKDKNQHYLDL
KALCQREETIKDLESYRDRLEAGKPCPLCGACEHPAIEQYASLTLTDNQRRRDALEKEVA
ALKEEGLLILGQVKALTQQLQRDTEAAGRLAEEEQALTKAWQETCASLHITRDIAQEIND
WMQEQERYEQQLYQLSQRLMLQSQLNDQQALERQAEQQLAATRQGLESALQALALSLPAE
GTEAAWLHARESEFAQWQAQQTQHDAIQQQIAALRPLLETLPTSDETEVEAESAIPDNWR
EIHEECLSLHSQLVAQQQQETQEKARLDQSQAQFTSALAASRFSDREAFLAALLDDETAQ
RLTQLKQTLEQQLQQAAALCEQATRQHEAHLALRPQGVDADVPTLQTQLHAMAQRLRDNT
TRQGEIRQQLRQDAESRQQQQALGQQIAEAAQLADDWGYLNSLIGSSTGDRFRKFAQGLT
LDNLVWLANQQLNRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKIIGVISHVEAMKDR
IPVQIKVKKINGLGYSRLDKAFAVE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgtctgaaaaacctcaactccctgaaaggggaatggaagata
gactttaccgccgagccgttcgccagcaatggcctgttcgccattaccggcgccaccggg
gccgggaaaaccacgctgctcgatgccatttgcctggcgctctatcatgaaacgccgcgc
ctgaataaagtctcccagtcgcaaaacgacctgatgacccgcgataccgccgagtgtctg
gcggaagtcgagtttgaagtaaaaggcatcgcctaccgcgctttctggagccagaaccgg
gcccgtaaccagccggatggcaatctgcaggcgccccgcgtcgagctggcgcgctgcgct
gacggcaaaatcctcgccgataaagtctcggacaagctggagcaaaccgcgacgcttacc
ggcctcgactatggccgcttcacccgctcgatgctgctttcccaggggcaatttgccgcc
ttcctgaacgcgaagccgagcgatcgcgcggagctgctggaggagctgaccggcacggaa
atctacggccagatttcagccatggtctacgaacagcacaaagccgctcgccatgcgctg
gagaagttcgaagcccaggcggcgggcatcgtcctgttgacggaggcccagcagcaggcg
ctgcaggaaagtttgcaggtacttactgacgaagaaaaagccctgctggcccagcagcag
agccagcagcagcagctccagtggctgacccgccgcgacgagctggcgcagcagcagcag
caggccgccacccggcagcagcaggcccgccaggcgctggcggacgccgccccggcgctg
gcgaagcttgagctggcccagcccgccgcccaactgcgtcccctgtgggagcgccagcag
gagcagacggcaggcctggcgcaaacccggcagcggatcagtgaagtaaatgctcgctta
cttgccagcacggcgctgcgcgcgcgcatccgccagggcgccttgcgcgctcagcagcag
cgtcaggctgaactggccgatctggcgcagtggctggccgcccatgagcgtttccgctta
tggggtcaggagatcgccggctggcgagcgcaattctcgcaactgacgcgggataaacaa
cagctaacggctcagagcacccgcctggccgcgctacgccagaagctggccacgctgcca
gccagccctctcaccctgagcgcggatgacgttgccgcagcgatagaacagcaaacccaa
tcgcggccgctgcgccagcgcttgatctccctgcatgagcagcatcagctgctgcgcaag
cgtctgcgccagaacgccgacagcgtccagcaggcgcaggcggagcaggtaaaacttaac
gctaccctgacgctgcgccgggaacaatataaagacaaaaaccagcactatctcgacctg
aaggcgctctgccagcgggaagaaacgattaaagacctggaaagctaccgcgaccggctc
gaggcgggtaagccctgtccgctgtgcggcgcctgtgaacacccggcgattgaacaatac
gcctcgttgacgctcacggataatcagcgccgccgcgatgcgctggaaaaggaggtcgcc
gcgctgaaagaagaaggcctgctgatcctcgggcaggtcaaggccctgacgcaacagctt
cagcgtgacaccgaagcggccgggcggctcgcagaggaagagcaagcgcttactaaagcg
tggcaggagacctgcgcctctctgcacatcacgcgggatattgcgcaagagataaacgac
tggatgcaggagcaggagcgctacgagcagcagctctatcagctcagccagcgcctgatg
ttgcagagtcagcttaacgatcagcaggcgctggagcgccaggccgagcagcagctggcg
gccacgcgccagggactggagagcgccctgcaggccctggccctgagcctgccggcagaa
gggacagaagccgcctggctgcacgctcgcgaaagcgaatttgcccagtggcaggcgcaa
cagacccaacatgatgccattcagcagcaaatcgctgctctgcggccactgctggagacg
ctgccgaccagcgacgagacagaggttgaagctgagtcggccatcccggacaactggcgc
gaaatccacgaggaatgcctgtcgctgcacagccagcttgtcgcccagcagcagcaggaa
acccaggaaaaggcgcgtctggaccagtcgcaggcgcaattcacctccgccctggccgcc
agccgctttagcgatcgggaggcgttcctcgccgcgctgctggatgacgagaccgcccag
cggctgacgcagttaaaacagacgctggagcagcagcttcagcaggcggccgcgctctgc
gagcaggcgacccggcaacatgaggcgcacctggcgctgcgtccgcaaggggtggacgct
gacgtccccaccctgcaaacccagctgcacgccatggcccagcggctgcgggataacact
acccgccagggtgagatccgccagcagctcaggcaggacgcagagagccgtcaacagcag
caggcgctggggcagcagattgcagaggcggcgcagctggcggacgactggggctatctc
aattcgctgatcggctccagcaccggcgaccggttccgcaaattcgcccaggggctgacg
ctggataatctggtctggctggcaaaccagcagctcaaccgcctgcatggccgctatctg
ctacagcgcaaggccagcgaggcgctggagctggaggttgtcgatacctggcaggccgac
gccgtgcgcgacacccgcaccctctccggcggcgaaagtttcctcgtcagcctggcgctg
gccctggcgctgtcagacctggtgagccataagacgcggattgactccctgtttcttgat
gaaggcttcggcaccctcgacagcgaaacgctggacacggcgctggacgccctggatgcc
cttaacgccagcggtaagattatcggggtgatcagccacgtggaggcgatgaaagaccgc
attccggtgcagatcaaagtgaagaagattaacggcctgggctatagccggctggacaaa
gcgtttgcggtggagtga
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integrated database retrieval system
