Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1): A79E_4745
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Entry
A79E_4745 CDS
T02213
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kpp
Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1)
Pathway
kpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A79E_4745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpp03400
]
A79E_4745
DNA repair and recombination proteins [BR:
kpp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A79E_4745
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A79E_4745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
AAA_21
Viral_helicase1
T2SSE
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AFQ67945
LinkDB
All DBs
Position
5036907..5039732
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLAQPEGLRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLAQRLAESFETALELSGGTAIVANMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWGTLSANVQKVVLYGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCDGTRLRREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLEAIMAVPESLTGQFMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccgcgcgacaaactcattgtcgtcaccgggctttccgggtctggcaaatcttcactc
gctttcgacaccctgtatgccgaaggccagcgtcgctacgtcgaatcgctctccgcctat
gcgcgacagttcttgtcgctgatggagaagccggacgtcgaccatatcgaagggctgtcg
ccggcgatttccatcgaacagaaatcaacctctcacaacccccgctcgacggtgggtact
attaccgaaattcacgactatctgcgtctgctgtacgcccgcgtcggcgaaccacgctgt
ccggatcacgatgtgccgctggcggcgcaaaccgtcagtcagatggtcgataatgtcctc
gcccagccggaaggcctgcgcctgatgctgctggcgcccattattaaagagcgcaaaggc
gagcacactaaaaccctggaaaacctcgccagtcagggctacatccgcgcgcggatcgac
ggcgaggtctgcgatctgtcggatccgccgaagctggagctgcagaagaagcacaccatt
gaggtagtcatcgaccgcttcaaggtgcgcgacgatctggcgcagcgcctggccgagtcg
ttcgaaaccgcgctggagctctccggcgggaccgccattgtggctaatatggatgatgag
aaagcggaagaactgctgttttccgccaacttcgcctgcccgatctgcggctacagcatg
cgcgagctggagccgcgtctgttctcctttaacaacccggcgggcgcctgcccgacctgc
gacggcctcggcgtgcagcaatatttcgatcccgatcgcgtggtgcaaaatcccgagctg
tcgctggcgggcggcgccatccgcggctgggatcggcgtaacttctactacttccagatg
ctgaagtcgctggcggagcactataaattcgacgtcgaagcgccatggggcaccctcagc
gccaacgtgcagaaagtggtgctgtacggttcaggtaaagaaagtattgaattcaaatac
atgaacgaccgcggcgatacctcggtgcgccgccatccgttcgaaggcgtgctgcataac
atggagcgccgttacaaagagacggaatccagcgcggtgcgcgaagagctggcgaagttc
atcagcaaccgtccgtgcgccagctgcgacggcacgcgtctgcgtcgcgaggcgcgccac
gtgtttgtggaaaacaccccgctgccgaccatttccgatatgagcatcggccatgcgatg
gatttcttcaacaatctgaagctctccggccagcgggcgaaaatcgccgaaaaagtgctg
aaagagattggcgatcgtctgaaattcctcgtcaacgtcggcctcaactacctgacgctc
tcccgctcggcggaaacgctctccggcggcgaagcccagcgtatccgtctggcaagccag
attggcgccgggctggttggcgtgatgtacgtgctggatgaaccctctatcggcctgcac
cagcgtgataacgaacgcctgctcggcaccctgatccacctgcgtaatttaggcaacacg
gtgatcgtcgttgagcacgacgaagacgccattcgcgccgccgaccatgtgatcgatatc
ggtcccggcgctggcgttcacggcggccaggtagtagcggaagggccgctggaggccatt
atggcggtcccggaatccctgaccggccagttcatgagcggtaaacgcaaaattgaagtg
ccgaaacagcgcgtgcccgccaacccggagaaagtcctcaaactgaccggcgcgcgcggc
aacaacctgaaggatgtaacgctcaccctgccagtgggcctgtttacctgcatcaccggc
gtctccggctcgggtaaatccacgctgatcaacgataccctgttcccgattgcccagcgc
cagctcaacggcgcgaccatcgccgaaccagcgccgtatcgcgatatccaggggctggaa
catttcgataaagtgatcgatatcgaccagagcccgatcggccggacgccgcgctccaac
ccggcaacctataccggggtgtttaccccggtgcgcgagctgttcgccggcgtaccggag
tctcgctcacgcggctatacgccggggcgctttagctttaacgttcgcggtgggcgctgc
gaagcctgccagggtgacggcgtcattaaggttgagatgcacttcctgccggatatctac
gtgccgtgcgaccagtgcaaaggcaaacgctataaccgcgaaacgctggagattaagtac
aagggtaagaccatccacgaagtgctggatatgaccattgaagaggcgcgtgaattcttt
gatgccgtaccggcgctggcgcgtaagctgcaaaccctgatggacgtcggcctgacctat
atccgccttggccagtcggcgacgaccctgtccggcggcgaggcgcagcgcgtgaagctg
gcgcgcgagttgtccaagcgcggtaccggccagacgctgtatatcctcgatgagccgacc
accggtctgcacttcgccgatatccagcagttgctggaagtgctgcaccagctgcgcgat
cagggcaataccatcgtggtgattgagcacaacctcgatgtgattaaaactgccgactgg
attgtcgatctcggcccggaaggcggcagcggcggcggcgaaatcctggtctccggtacg
ccggaaaccgtcgccgagtgcgaagcctcgcacaccgcgcgcttcctcaagcccatgctg
aaataa
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