Klebsiella pneumoniae subsp. pneumoniae KPR0928: KPR0928_19405
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Entry
KPR0928_19405 CDS
T03371
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kpq
Klebsiella pneumoniae subsp. pneumoniae KPR0928
Brite
KEGG Orthology (KO) [BR:
kpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpq03009
]
KPR0928_19405
Enzymes [BR:
kpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPR0928_19405
Ribosome biogenesis [BR:
kpq03009
]
Prokaryotic type
rRNA helicases
KPR0928_19405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIE29751
LinkDB
All DBs
Position
4000429..4001760
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AA seq
443 aa
AA seq
DB search
MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV
NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAQKKKDEKEKPRVKKRHR
DTKNIGKRRKPSAAGTPSASSDE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggaagccctccag
gataaaggtttcactcgcccgacagccattcaggccgccgctattccgcctgcgctcgat
ggccgtgacattctcggttcagcgccgaccggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggcccgccgcgcattctt
atcctgacgccgacccgtgagctggcgatgcaggtggccgaccacgcccgcgagctggcg
aagcatacccatctggacatcgccaccattaccggcggcgtggcgtacatgaaccacgcg
gaagtgttcagcgaaaaccaggacatcgtagtcgccaccaccggtcgcctgctgcaatat
attaaagaagagaatttcgactgccgcgccgtcgagaccctaatcctcgatgaagccgac
cgcatgctggatatgggttttgcccaggatatcgaaaccatcgccggtgaaactcgctgg
cgcaagcagactatgctgttctccgcgacgctggaaggcgatgcgatcaaagacttcgct
gagcgtctgctggaggagccggttgaagtttccgccaatccgtcaacccgcgagcgtaag
aaaatccatcagtggtactaccgcgccgacgatatcgaacataaaaccaaactgctggtg
aatctgttgcaacagccggaagccacccgcgctatcgtgtttgtgcgtaagcgcgagcgc
gtgcatgagctggctaactggctgcgtgaggccgggattaacacctgctggctggaaggc
gagatggtgcaggccaagcgaaacgaagctatcaagcgcctgaccgacggccgcgtcaac
gtgctgatcgccaccgacgtcgctgcccgcggtatcgatattccggacgtcagccacgtc
tttaacttcgatatgccgcgtaccgcggatacctacctgcaccgtatcggtcgtaccggc
cgcgccggtaaaaaagggaccgccatttctctggtcgaggctcatgaccacctgctgctg
ggtaagattggtcgctatattgaagagccgttgaaagccagagttatcgatgaactgcgc
ccgacgacccgtgcgccgagcgagaagctgacgggtaagccatcgaagaaagtgctggcg
aagcgtgcgcagaagaaaaaagatgaaaaagagaaaccgcgggtgaagaagcgccaccgc
gatacgaaaaatatcggtaagcgccggaagccaagcgcggccgggacgccatcagcgtcc
agcgatgagtaa
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