Klebsiella pneumoniae subsp. rhinoscleromatis SB3432: KPR_2137
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Entry
KPR_2137 CDS
T02793
Symbol
holB
Name
(GenBank) highly similar to DNA polymerase III, delta prime subunit from Escherichia coli O103:H2 strain 12009 - EHEC (tr|C8U5Q4)
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kpr
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
Pathway
kpr03030
DNA replication
kpr03430
Mismatch repair
kpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPR_2137 (holB)
03430 Mismatch repair
KPR_2137 (holB)
03440 Homologous recombination
KPR_2137 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpr03032
]
KPR_2137 (holB)
03400 DNA repair and recombination proteins [BR:
kpr03400
]
KPR_2137 (holB)
Enzymes [BR:
kpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPR_2137 (holB)
DNA replication proteins [BR:
kpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPR_2137 (holB)
DNA repair and recombination proteins [BR:
kpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPR_2137 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
CCI76367
LinkDB
All DBs
Position
2236196..2237200
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AA seq
334 aa
AA seq
DB search
MKWYPWLRPSFEQLVGSYQAGRGHHALLLQSLNGMGGEALIYALCRFLMCRQPEGHKSCG
HCHSCQLMQAGTHPDYYALSPEKGKSALGIDAVRDVNEKLYEHARLGGAKVVWISDAALL
TDAAANALLKTLEEPPENTWFFLACEEPARLLTTLRSRCRLHHLAPPSEPYALAWLEREV
SLPQESLLTALRLCASAPAAALELLQEPLWTARQQLCQALAATLASGDWLALLPILNHEQ
AAVRLHWLASLLVDAQKRQQGITLVSNPDVWPLLEQLAHSLPAARLQAIAHDVCTCREQL
LNVVGVNRELLLTERLLRWEHYLQPGTVSPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggctgcgcccctcgttcgagcaactggtcggtagctatcaggcc
ggacgaggccaccacgccttactgttacagtccctgaacgggatgggcggcgaggcgttg
atttacgcgctgtgccgcttcctgatgtgccgccagcccgaaggacataaaagctgcggc
cactgccatagctgtcagctgatgcaggctggcacgcaccccgattactatgcgctcagc
cccgagaagggcaagagcgcgctgggtattgacgcggtgcgcgatgtcaatgaaaagctc
tatgaacatgcgcgccttggtggggcaaaagtggtctggattagcgatgctgccttgctg
accgatgccgccgccaacgcgttgctgaaaacgctggaggagcccccggagaatacctgg
ttcttcctcgcctgcgaggagccggcgcgtctgctgaccactctgcgcagccgctgtcgc
ctgcatcatctggcgccgccgtctgagccttatgctctggcctggctggagcgtgaggtg
agcctgccgcaggagtcattgttgaccgcgttacgcctgtgcgccagcgcgccggctgcg
gcgctcgaactgttacaggaaccgctgtggacggcgcggcagcagttgtgtcaggcgctg
gcggctaccctggcgagcggtgactggctggcgctgctgccgatactcaatcatgaacag
gcggcggttcgcctgcactggctggcgtcgctgctggtcgatgcgcaaaaacgacagcag
gggattaccctggtgagtaaccctgacgtctggccgctgctggagcagctggcgcacagc
ctgcccgccgcccggctgcaggcgattgcccatgacgtctgtacctgccgcgagcaattg
ctcaacgttgtcggtgtcaaccgcgaactgctgcttaccgagcgcctgctgcgctgggaa
cattacctgcaacccgggacggtttcacccgtctcccacctctga
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