Klebsiella pneumoniae subsp. rhinoscleromatis SB3432: KPR_3758
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Entry
KPR_3758 CDS
T02793
Symbol
rhlE
Name
(GenBank) highly similar to putative ATP-dependent RNA helicase RhlE from Escherichia coli O6 (tr|Q8FJN4)
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpr
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432
Pathway
kpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPR_3758 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpr03019
]
KPR_3758 (rhlE)
Enzymes [BR:
kpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPR_3758 (rhlE)
Messenger RNA biogenesis [BR:
kpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPR_3758 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CCI77986
LinkDB
All DBs
Position
complement(3864422..3865777)
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQNN
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgtgac
ctgatggccagcgcccagaccggcaccggtaaaacggcgggctttaccctgccgctgctg
cagcgcctgatccagaatgagccgcacgcaaagggccgtcgtccggtgcgcgcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagtaaa
tacctgaatattcgctcgctggtggtcttcggcggcgtgagtatcaacccgcagatgatg
aagctgcgcggcggcgtcgacatcctcgtcgccaccccgggccgtctgctggacctcgaa
catcagaacgccgtcagtcttgataaagtagaaatcctcgtgctggacgaagcggaccgt
atgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccggcgcgt
cgacagaacctgctgttctcggcgaccttctccgacgagatcaagggcctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgtaacaccgcgtccgagcagatc
acccagcacgtccattttgttgacaagaaccgcaagcgtgaactgctgtcgcagcttatc
ggcgaaggcaactggcagcaggtgctggtgtttacccgtaccaagcatggcgccaaccac
ctcgcggaacagctcaacaaagacggcatccgcagcgcggcgatccatggcaacaagagc
cagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggtcgcgcggcg
gccaccggcgaagccttatcgctggtgtgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggtggtcgtgggcaa
ggtcagggacgcggcggccagggtcagggacgcagcggacagccgcgcagccagaataat
gccccgcgccgtcaggacggcgaggcgccgaaagcgcgcactcaggacggcaaaccgcct
cgccgccgtcgcccgcgtaaaccggctggcgaataa
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