Kosakonia pseudosacchari: IP581_00865
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Entry
IP581_00865 CDS
T06897
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03420
Nucleotide excision repair
kpse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IP581_00865 (uvrD)
03430 Mismatch repair
IP581_00865 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_00865 (uvrD)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IP581_00865 (uvrD)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IP581_00865 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IP581_00865 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
QOV64276
LinkDB
All DBs
Position
181727..183889
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAAERSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGELISLYCAFNELDEARYVVNRIKAWQDNGGQLSQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQATRELLQEKALAGRAASALQRFLELIDALAQETADMPLHVQ
TDRVISDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRASISRPVSHQRMG
TPVAQSDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagccgcc
gagcgcagcaatatgctggtgctggcaggggcggggagcggtaagacgcgcgtgctggta
caccgtattgcctggctgatgaccgtggaaaactgctcgccatactccattatggcggtg
actttcaccaacaaagcggcggcggagatgcgtcaccgtatcggtcagttgatgggtacg
tcgcagggcgggatgtgggttggcacgttccacggcctcgcgcaccgtttgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagattctggacagcgaagatcagctg
cgtttgctcaaacgcctgatcaaagcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggccagaaagacgaaggcattcgtccgcaccatattcaa
agtttcggtaacccggtggaacaaacctggcagaaagtttaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgaactgctgctgcgcgcccatgagctgtgg
ctcaacaagccgcatattttgcagcattaccgcgaacgctttaccaatatcctggtggac
gagttccaggataccaacaacattcagtacgcgtggatccgtctgctggcgggcgatacc
ggcaaagtgatgattgtcggcgacgatgatcagtccatctacggttggcgcggtgcgcag
gtggaaaacatccagcgcttcctgaaagacttccccggcgcgcagactatccgcctggag
cagaactaccgttcgaccagcaatatcctgagcgcggcgaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaaactgtggaccgatggcgtcgatggcgagctgatttcgctt
tactgcgcctttaacgagctggatgaagcgcgttatgtcgtcaatcgcattaaagcctgg
caggataacggcgggcagctctcgcagtgcgccattctctatcgtagtaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaagccagcatgccataccggatttatggcggtatg
cgcttcttcgaacgtcaggaaattaaagatgcgctctcttacctgcgcctgatcgccaat
cgtaacgatgacgctgcctttgaacgtgtggtgaatacgccaacgcgcggcatcggcgat
cgcacgctggacgtggtgcgccaaacctcgcgcgatcgccagttaaccttgtggcaggca
acgcgggaactgttacaagagaaagcgctggcgggccgcgcggcgagcgcgctgcaacgt
ttcctggaactgattgacgcgctggcgcaggaaacggcggatatgccgctgcatgtgcaa
accgaccgggtgatcagcgattccggcctgcgcatgatgtacgagcaggaaaaaggcgaa
aaaggccagacgcgtatcgagaacttagaggaactggtcaccgcgacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcgtttctctcccacgccgcactg
gaagcgggcgaagggcaggcggatacctggcaggatgcggtgcagttaatgacgctgcac
tcggcgaaagggctggagttcccgcaggtgtttattgtcggcatggaagagggcatgttc
cccagccagatgtcgctggatgaaggtggtcggctggaagaggagcgccgtctggcgtat
gtcggcgtgacgcgcgcgatgcaaaagctgacgctgacctacgcggaaacccgccgtctg
tacggcaaagaagtgtatcaccgcccgtcgcgctttatcggcgaactgccggaagcgtgt
gtggaagaggtgcgtctgcgtgccagcatcagccgcccggttagccaccagcgcatgggt
acgccggtggcgcaaagcgacacggggtataaactcggccagcgcgtacgccatgccaaa
tttggtgagggcacggtggtgaacatggaaggcagtggcgagcacagccgtttgcaggtg
gctttccaggggcagggtatcaagtggctggtggcggcttacgccaggctcgaaaccgtg
taa
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