Kosakonia pseudosacchari: IP581_00900
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Entry
IP581_00900 CDS
T06897
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IP581_00900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpse03019
]
IP581_00900 (recQ)
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_00900 (recQ)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IP581_00900 (recQ)
Messenger RNA biogenesis [BR:
kpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IP581_00900 (recQ)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IP581_00900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QOV64282
LinkDB
All DBs
Position
188695..190521
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQQDIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALVLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQFEVINGCRNGQIRLLY
IAPERLMLDNFLDQLRLWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQMLPSVPFMAL
TATADDTTRRDIERLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKCGI
VYCNSRAKVEDTAARLQSRGFSAAAYHAGLENEVRARVQEQFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPRQYDGLQDAQKAL
SAIYRVNQRFGMGYVVEVLRGANNQRIREFGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
FATQNIAQHSALQLTEAARPLLRGEVPLMLAVPRMVALKPKVMQKAAVGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLSVNGVGTRKLERFGQEFMALIR
AHVDGEEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattgaatcaggaatcgctggcgaaacaggttctgcaagagacc
ttcggctaccagcaattccgcccgggccagcaggacattatcgacaccgtgctcagtggc
cgcgactgtctggtggtgatgccaaccggcggcgggaaatccctgtgctaccaaattccg
gcgctggtattagatggcctgacggtggtggtttcaccgctcatttcgctgatgaaagat
caggtcgaccaactgctggcaaacggtgtcgcagcggcgtgcctgaactctacccagagc
cgcgaacagcagtttgaggtgatcaacggctgtcgcaacggccagattcggttgctctat
atcgcccccgagcgcctgatgctcgacaacttcctcgatcaactgcgcctgtggaatccg
gtgttgttagccgtggacgaagcgcactgtatttctcagtggggtcatgatttccgtccg
gaatacgccgcgctgggccagttgcgccagatgctgccttccgtgccgtttatggcgctg
accgccaccgctgatgacaccacccgccgcgacatcgaacgtttgctggggcttaacgat
ccgctgattcaggtcagcagcttcgaccgcccgaacatccgctacatgctgatggaaaaa
tttaagccgctcgatcagctcctgcgttatgtgcaggagcagcgcggcaagtgcggcatc
gtgtattgcaacagtcgggcgaaagtggaagacaccgctgcccgtttgcaaagccgcggt
tttagcgcggcggcctaccatgccgggctggaaaatgaggtgcgggcgcgggtgcaggaa
cagttccagcgcgacgatctccaaattgtcgtggcgacggtggcgtttggtatgggcatc
aacaagcctaacgtgcgtttcgtggtgcatttcgacattccgcgcaatatcgaatcgtat
tatcaggagactggtcgcgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgcctggaagagaagcccgccgggccgctg
caggatatcgagcggcacaagctcaatgcgatgggcgcgtttgccgaagcgcaaacctgc
cgccgtctggtgctgctgaactactttggcgaaggtcgccaggagccctgcggtaactgc
gatatttgcctcgatccgccgcgccagtacgatggtttgcaggacgcgcaaaaagcgttg
tcggctatctaccgcgtcaatcagcgtttcggtatgggctatgtggtggaagtgctgcgc
ggggcgaacaaccagcgtatccgcgagtttggccacgacaaattaccggtatatggcatt
ggtcgcgagcaaagccacgaacattgggtaagcgtgatccgccagttgattcacttaggt
ttcgccacgcaaaacattgctcagcactcggcgttgcagctcaccgaagcggcgcgcccg
ctactgcgcggtgaagtcccgctgatgctggcggtgccgcgtatggtggcgctgaaaccg
aaagtgatgcagaaagcggcggtcggcaattacgaccgcaagctgttcgccaagctgcgc
aagttgcgtaaagcgattgccgatgaagagaatattccgccttacgtggtgtttaacgat
gcgacgctgattgaaatggccgaacagatgccgctctctcccggcgaaatgctcagcgtc
aacggtgtggggacgcgcaaacttgagcgcttcggccaggagtttatggcgctgatccgc
gcgcatgtcgacggcgaagaagagtag
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