| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
kpse Kosakonia pseudosacchari
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kpse00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IP581_01140 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:kpse03021]
IP581_01140 (rpoC)
03400 DNA repair and recombination proteins [BR:kpse03400]
IP581_01140 (rpoC)
Enzymes [BR:kpse01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IP581_01140 (rpoC)
Transcription machinery [BR:kpse03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IP581_01140 (rpoC)
DNA repair and recombination proteins [BR:kpse03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IP581_01140 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
237507..241730
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| AA seq |
1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDANGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKTVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVAGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTSGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKIGATYARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcatggtcttttggtgaagttaagaag
ccggaaaccatcaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgtgatctgtgagaagtgcggcgttgaagtgacccagaccaaagtgcgtcgtgag
cgcatgggccacatcgagctggcatctccgaccgcccacatttggttcctgaaatctctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatatcgaacgtgttctgtac
ttcgaatcctatgtggttatcgaaggcggtatgaccaatctggaacgtaaccagatcctg
accgaagaacagtacctggacgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggcgccgaagctattcaggccctgctgaaaagcatggatctggagcaagagtgcgaacag
ctgcgcgaagagctgaacgaaaccaactccgaaaccaaacgtaagaaactgaccaagcgt
atcaaactgctggaagcgttcgtacagtctggtaacaaaccggagtggatgatcctgacc
gttctgccagtgctgccgccggatctgcgtccgctggttccgctggatggtggtcgtttc
gcaacgtcggatctgaacgatctgtaccgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggcggcgccggacattatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggccgtcgcggtcgtgcgatcaccggttccaac
aaacgtccgctgaaatctttggccgatatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaaacgtgttgactactccggtcgttctgtgatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgccaccactatcaaagccgcgaagaaaatg
gttgagcgcgaagaagctgttgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaacactgcaccgtctgggtatccaggcgtttgaaccggta
ctgatcgaaggtaaagctattcagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtccaccaacaacattctgtctccggcgaacggcgaacctatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttaccgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgagtacgaaaaagacgctaac
ggcgaattcgtagcgaaaaccagcctgaaagacacgaccgttggccgtgcgattctgtgg
atgatcgttccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagcg
atctccaaaatgcttaacacctgttaccgcattctgggcctgaaaccgaccgttattttt
gctgaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggcgaaaaaacacgagatcatctctgaggcagaagccgaa
gttgctgagatccaggagcagttccagtctggtctggtgaccgctggcgaacgctacaac
aaagttatcgatatttgggccgcggcgaacgatcgcgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgttattaaccgtgacggcgttgaagagcagcaggtttcctttaac
agcatctacatgatggccgactccggtgcgcgtggttctgcagcccagattcgtcagctt
gctggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaaccgcgaactccggttacctgacccgtcgtctg
gttgacgtagcgcaggatctggtcgtaaccgaagacgattgtggcacgctggaaggcatc
accatgacgccggttatcgaaggtggtgatgttaaagagccgctgcgcgatcgcgttctg
ggtcgtgtaactgcagaagacattctgaagccgggtaccgcagatattctggttccgcgc
aacacgctgctgcacgaacagtggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtgcgttccgttgtatcgtgtgacaccgactttggtgtgtgcgcccactgctatggc
cgtgacctggcgcgtggtcacatcatcaacaaaggtgaagccatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatccgcctg
agcaatgcgaagacggttgtgaattccagtggcaaactggttatcacctcccgtaacact
gagctgaaactgatcgacgaattcggtcgtaccaaagaaagctataaagtgccttacggt
gcggtcatggcgaaaggtgatggcgagcaggttgctggcggtgaaaccgttgcaaactgg
gatccgcacaccatgccggttatcactgaagtggctggtttcatccgcttcaccgatatg
atcgatggtcagacgattacgcgtcagaccgacgaactgaccggtctctcttcgctggtg
gttctggactccgcagagcgtacctctggcggtaaagacctgcgtccggcactgaaaatc
gttgacgccaatggcaacgacgtactgatcccgggcaccgatatgcctgcccagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctccggtgacacc
ctagcgcgtattccgcaggaatccggcggtaccaaggatattaccggtggtctgccgcgc
gttgcggatctgttcgaagcacgtcgtccgaaagaaccggcaatcctggcggaaatcagc
ggtatcatctccttcggtaaagagaccaaaggtaaacgtcgtctggtgatcacaccggtt
gacggtagcgaaccgtacgaagagatgattccgaaatggcgtcagctcaacgtgtttgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcgccgcacgacatt
ctgcgtcttcgtggcgtacacgcggtaacgcgttatatcaccaacgaagtacaggacgtt
taccgtctgcagggcgttaagatcaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgttaacgcaggaagctccgacttcctggaaggtgagcaggtt
gaatactctcgcgtcaagatcgctaaccgcgaactcgaagcgaacggcaaaatcggtgca
acctatgcacgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgtgtgcttaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgtggtctgaaagagaacgttatcgtgggtcgtctgatcccggctggt
accggttatgcgtaccatcaggatcgtatgcgccgtcgtgccgctggcgaactgccggca
gcaccgcaggtgactgcagaagacgcgtccgcgagcctggcagaactgctgaacgcaggt
ctgggtggttccgacaacgagtaa |
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