Kosakonia pseudosacchari: IP581_01550
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Entry
IP581_01550 CDS
T06897
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IP581_01550 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_01550 (uvrA)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IP581_01550 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IP581_01550 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QOV64390
LinkDB
All DBs
Position
complement(328576..331401)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRDDLAQRLAESFETALELSGGTAVVADMDEP
TAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWESLSANVQKVVLSGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTLDAIMAVPESLTGQYMSGKRKIEL
PKQRVKADPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
ttggataagatagaagtacggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccccgcgacaaactgattgtcgttaccgggctgtcgggttctggtaagtcctcactg
gctttcgacacactctatgccgaagggcagcgtcgttacgttgaatcactctccgcgtat
gcgcgtcagtttctgtcgctgatggaaaaaccggacgttgaccacattgaaggtttatcg
cccgccatttctattgaacaaaaatcgacatcccacaacccgcgttccaccgttggtacg
atcacggaaattcacgattacctgcgtctgctgttcgcccgcgttggcgagccgcgttgc
ccggatcacgacgttccgctggcggcgcaaaccgtgagccagatggtggataacgtgttg
tcgcagccagaaggcaaacgcctgatgctgctggcgccggtgatcaaagagcgcaaaggc
gagcacaccaaaacgctggaaaaccttgcaagccagggttatatccgtgcgcgtattgat
ggcgaagtgtgcgatctttccgatccgccgaagctcgagctacaaaagaaacacaccatt
gaagtggtgattgatcgctttaaagtccgcgacgatctcgcccagcgcctggcggaatcc
tttgaaaccgcgctggagctttccggcggcacggccgtggttgccgatatggacgagccg
accgccgaagagctgctgttctccgccaacttcgcctgtccgatttgtggctacagcatg
cgcgagctggaaccgcgtctgttctcattcaacaacccggctggcgcctgcccgacctgc
gacggtctgggcgtgcagcaatatttcgatccggatcgcgtgatccagaacccggagctg
tcgctggccggtggtgcgatccgcggttgggatcgccgcaacttctactattttcagatg
ctgaaatcgctggcggaacactacaaattcgatgtggaagcgccgtgggaaagcctgagc
gccaacgtgcagaaagtggtgctgtctggttccggtaaagagtcgattgagttcaaatac
atgaacgatcgcggcgatacttccgtgcgtcgtcacccgtttgaaggcgtgctgcataat
atggagcgccgttacaaagagacggaatccagcgcggtacgtgaagagctggcgaaattt
atcagcaatcgcccgtgcgcctcctgtgaagggacgcgtctgcgtcgcgaagcgcgccac
gtttttgttgaaaacaccccgctgccgaccatttccgatatgagcatcggccatgcgatg
gacttcttcaacaatctgaaactttccggccagcgggcaaaaatcgccgaaaaagtgctt
aaagagattggcgatcgcctgaagttcctggtgaacgtcggcctgaactacctgacgctc
tcgcgctcggcggaaacgctctccggcggcgaagcgcagcgtattcgtctggcaagccag
attggcgcgggtctggtaggtgttatgtacgtgctggatgagccgtcaatcggcctgcat
cagcgcgataacgaacgtctgctcggcacgcttatccatctgcgtaatctcggtaacacg
gtgattgtcgttgaacacgacgaagacgccattcgcgccgccgaccatgtaatcgacatc
ggccctggtgcgggcgtacacggcggtcaggtggtggccgaagggacgctggatgccatc
atggcggtaccggaatcccttaccgggcagtacatgagcggcaaacgtaaaattgagctg
ccgaaacagcgcgtgaaagccgatccagaaaaagtgctgaagctgaccggcgcgcgcggt
aacaacctgaaagatgtgacgttgacgctaccggtgggcctgttcacctgtatcaccggc
gtttccggttccggtaaatcgacgctgatcaacgatacgctgttcccgatcgcccagcgt
cagttgaacggcgcgaccatcgccgaaccggctccgtatcgcgatgtgcaggggctggag
catttcgacaaagtcattgatatcgaccagagcccgattgggcgcacgccgcgctccaac
ccggccacttataccggcgtctttacgccggtacgcgagctgtttgccggcgtgccggag
tcccgctcgcgcggttacacgccggggcgcttcagctttaacgtacgcggcggtcgctgt
gaagcgtgtcagggtgacggcgtaatcaaggttgagatgcactttctgccggatatttac
gtgccgtgcgaccagtgcaaaggcaagcgctacaaccgcgaaacgctggagatcaaatac
aaaggcaagaccatccatgaagtgctggatatgactatcgaagaagcacgcgagttcttc
gatgctgttccggcgctggcgcgtaagctgcaaacgctgatggatgttggcctgacctat
attcgtcttggacagtcggctacgacgctttccggcggtgaggcccagcgcgtgaaactg
gcgcgcgagctgtcgaaacgcggcaccgggcagacgctctatatcctcgacgaaccgacc
accggcctgcactttgcggatatccagcagttgctggatgtgttgcatcagttacgggat
cagggcaacaccattgtggtgattgagcacaacctggacgtgattaaaacggcggactgg
attgtcgacctcggcccggaaggcggtagcggcggcggcgagattctggtctccggcaca
ccggaaacggtcgccgaatgcgaagcctctcacacggcgcgcttcctcaaaccgatgctg
aagtaa
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