Kosakonia pseudosacchari: IP581_03585
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Entry
IP581_03585 CDS
T06897
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpse03021
]
IP581_03585 (rapA)
Transcription machinery [BR:
kpse03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IP581_03585 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
GT_PLOD
Motif
Other DBs
NCBI-ProteinID:
QOV64763
LinkDB
All DBs
Position
complement(770130..773036)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPATGENRLYARSDSPVTRVMFNPGDT
VTSHDGWQLTIEDVKEENGLLAYTGTRLDTQESNVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRMPWSGLRGQRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLAGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DADNPFDTEQLVICSLDFVRRNKQRLEHLCDAEWDLLVVDEAHHLVWSENEASREYQAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLL
AGERLSNDDLNMLSDLVGEQDIEPLLQTANSDREGATAARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTVKLPLPTQYQTAIKVSGIMGARKSQEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVHNELINYLAAPEDT
DGFDQLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIAEQDDDTALIAFAM
NLFDIIGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFDRDVALSREDAQFVTWE
HPIIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPSTP
IRLLVDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQEVHTILQKGETQVEAAAR
ALIDAARSEADEKLSAELARLEALKAVNPNIRDDELAAIETNRLQVLESLAQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacacttggtcaacgctggattagcgacacggaaagcgaactcggacttggc
acagtcgtcgcaatggatgcgcgcacggtcaccctcctttttccggcaacgggtgaaaac
cgtctatacgctcgcagcgactctccggttacccgtgtgatgttcaaccccggtgatacg
gtgaccagccatgatggctggcagctcacaattgaagacgtaaaagaggaaaacgggctg
ctcgcttacaccggcacacgcctggatacgcaggaaagcaatgtcaccctgcgcgaagtg
ttactcgacagcaaactggtgttcagcaaaccgcaagaccgcttattcgccgggcagatc
gaccgtatggatcgcttcgcgctgcgttttcgcgcgcgtaaataccaaagtgaacagtac
cgcatgccgtggagcggcttgcgcggtcagcgcaccaacctgatcccgcaccagttgcat
atcgctcacgatgtgggtcgtcgccatgcgccgcgcgtgctgctggcggatgaagtgggt
cttgggaaaaccatcgaagccgggatgatcctgcatcaacagttgcttgcaggcgcggct
gaacgcgtgctgatcgtggtaccggaaaccctgcaacatcagtggctggttgagatgctg
cgccgcttcaacctgcgtttctccctgtttgatgatgaacgttacgccgaagcacagcac
gatgccgacaacccgttcgataccgagcaactggtgatttgctcgctcgatttcgtgcgc
cgtaacaagcagcgcctggagcacctgtgtgatgccgaatgggatctgctggtggtcgac
gaagcacaccatctggtgtggagcgaaaacgaagccagccgtgaatatcaggcaattgag
caactggccgagcgcgtaccgggcattctgctgctgacggccaccccggaacaattgggg
atggagagccactttgcccgcctgcgcttgctggacccgaaccgtttccatgatttcgcc
cagtttgtggaagagcagcaaaactaccgtccggtcgccgatgctgttgccctgctgctg
gcaggtgaacgcctgagtaacgatgatctcaatatgttgagcgatctggtgggcgagcag
gatatcgaaccgctgctgcaaaccgccaacagtgatcgcgaaggcgcgactgccgcgcgc
caggaactgatttctatgctgatggaccgacacggcaccagccgtgtgctgttccgcaac
acccgtaacggtgtaaaaggtttcccgaaacgcgaactgcacaccgttaagcttccgctg
ccgacgcagtatcagacggcgattaaagtctccggcattatgggcgcacgtaaaagccag
gaagagcgcgcccgcgatatgctctatccggagcagatttatcaggaatttgaaggcgat
accggaacatggtggaacttcgatccgcgcgttgagtggctgatgggctaccttaccagc
caccgttcgcaaaaagtgttggtgatctgcgccaaagccgccaccgcgctgcaactggag
caggtgttgcgcgaacgtgaaggcatccgtgcggcggtgttccatgaaggtatgtcgatt
attgaacgcgaccgtgcagcggcatggtttggtgaagaagatagcggcgcgcaggtgcta
ttgtgttcggagatcggctctgaagggcgtaacttccagttcgccagccatttggtgatg
ttcgatctgccgtttaacccggatctgctggagcagcgtatcggccgtctggatcgtatt
ggtcaggcgcacgatatccagatccacgtgccttatctggaaaaaaccgcgcagtccgta
ctggtgcgctggtatcacgaagggctggacgccttcgagcacacctgcccgacagggcgc
acaatctacgatagcgtccacaatgagctgattaactacctggcggcaccggaagatacc
gacggttttgatcagttgatcaaaacctgccgtgagcagcacgacgcgctaaaagcacag
ctggaacaaggccgcgaccgcttgctggagatccactctaacggcggtgagaaagcacag
gcgctggcggaaagcattgccgagcaggacgacgacacggcgcttattgccttcgccatg
aatctgttcgatatcattggcattaaccaggacgatcgcggtgaaaacatgatcgtgctg
acgccatcggatcatatgctggtgccggacttcccgggcctgccggaagatggctgcacc
atcactttcgatcgtgacgtcgcgctttcgcgcgaagacgcgcagtttgtcacctgggaa
catccgatcattcgtaacggtctggatctgatcctttctggcgataccggtagcagtacg
atttcgctactgaaaaacaaagcgctaccggttggtacgctgctgctggagctgatctac
gtggtggaagcgcaggcgccgaagcagctgcaacttaatcgcttcttgccgtcgacgccg
atccgcctgctggtagataaaaacggcaccaacctcgcggcccaagtggagttcgaaagt
ttcaaccgccagcttagcgcagtgaatcgccataccggcagcaaactggtgaacgcggtg
cagcaggaggttcacaccattttgcaaaaaggcgaaacgcaggtggaagccgccgcacgc
gcgctgattgacgccgcgcgcagcgaagcggatgaaaaactgtcggcggaactggcgcgc
ctggaagcgttaaaagcggttaacccaaacatccgcgacgatgaactggccgcgattgag
accaaccgtctgcaagtactggaaagcctggcgcaggcaagctggcggcttgatgcgctg
cgtttgattgtcgtgacgcaccaataa
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