Kosakonia pseudosacchari: IP581_04160
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Entry
IP581_04160 CDS
T06897
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03030
DNA replication
kpse03430
Mismatch repair
kpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IP581_04160 (dnaE)
03430 Mismatch repair
IP581_04160 (dnaE)
03440 Homologous recombination
IP581_04160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpse03032
]
IP581_04160 (dnaE)
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_04160 (dnaE)
Enzymes [BR:
kpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IP581_04160 (dnaE)
DNA replication proteins [BR:
kpse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IP581_04160 (dnaE)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IP581_04160 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QOV64870
LinkDB
All DBs
Position
907084..910566
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADFHVQSDLLGDELTQLTVLAINNTGYQNLTLLISRAYQRGYGALGPWIDRDW
LVELNEGLILLSGGRMGDVGKSVLRGNSALVEQCLEFYKTHFHDRYYLELIRTGRADEES
YLHAAVALAEEHGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSKQGL
EERLAFLFPDENVRAEKRPPYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
ALGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactattccatgattgacggg
ttggcgaaaaccgggccgctggtgaaaaaggcggccgcgctcggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggaacggcgcacggtgcc
gggatgaaaccaatcgtcggtgctgattttcatgtgcaaagcgatctgctcggtgacgag
ctgacgcagctcaccgttctcgctatcaacaatacgggttatcaaaacctgacactgctt
atttcgcgtgcctaccagcgtggttatggtgcgctgggtccgtggatcgaccgggattgg
ctggtagaactcaatgaagggctgattctgctttccggcgggcgcatgggcgacgtgggt
aaaagtgtgctgcgtggcaatagcgcactggtagagcagtgccttgagttctataaaacc
cattttcacgatcgctactacctggaactgatccgtacggggcgagcggacgaagagtct
tacctgcatgccgccgtcgcactggcagaagagcatggtttgccggtagttgctaccaac
gatgtgcggtttattgatgccggcgacttcgacgcccatgagatccgcgtggcgatccac
gacggttttaccctcgatgatcccaaacgcccgcgtaactattcgccgcagcaatacatg
cgcagcgaagaggagatgtgtgagctcttctcggatatcccggaagcgctggagaacacg
gtcgaaatcgccaaacgctgtaacgtcaccgttcgtcttggcgaatacttcctgccgcag
ttcccgacaggtgatatgaccactgaggatttcctcgtagcgaaatccaaacaggggctg
gaagaacgactggcttttctcttcccggatgagaacgtgcgcgctgaaaagcgcccacct
tacgatgaacgtctcgatgttgaactccaggttatcaaccagatggggttcccgggctac
ttcctcatcgtgatggaatttatccagtggtcaaaagataacggcgtgccggtagggccg
gggcgtggttccggtgcgggttcgctggtcgcttatgcgctgaaaattaccgatcttgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtgtcgatgcct
gacttcgacgtcgatttctgcatggaaaaacgcgaccaggttatcgagcacgtagcggat
atgtacgggcgcgatgcggtatcgcagatcatcacctttggtaccatggcggcgaaagcg
gttatccgcgacgttggtcgtgtgcttggtcacccgtatggctttgtcgaccgaatttca
aaactggtgccgcccgatccggggatgacgctggccaaagcgtttgaagccgaaccacaa
ctgccggaaatttacgaagccgacgaagaagtcaaagcgctgattgatatggcgcggaag
ctggaaggggtcacgcgaaacgccgggaaacacgccggtggggtggttatcgcgccaacc
aaaattaccgactttgcgccgctgtattgtgatgaagccggtcagcacccggttacccag
ttcgataaaaacgatgtggaatatgcgggcctggtgaagtttgacttcctcgggctgcga
acgctgaccatcattaactgggcgctggaaatgattaacgcccggcgcgagaagaatggc
gagccgccactggatatcgccgctattccgctggatgacaagaaaagtttcgatatgctg
caacgctcggaaaccacggcggttttccagcttgaatcccgcggcatgaaagatctgatc
aaacgcctgcagcccgactgcttcgaagatatgatcgcgctggtggcgctgttccgtccg
ggaccgctgcaatcgggcatggtggataacttcatcgaccgtaaacacgggcgcgaagag
atctcctacccggatgttcaatggcagcacgagagcctgaagccggtgctggagccaacc
tatggcatcattctgtatcaggaacaggtgatgcagattgcccaggtgctttccggttac
actcttggcggcgcggacatgttgcgccgtgcgatgggcaagaaaaagccggaagagatg
gccaagcagcgcggcacgtttgaagaaggcgcgaagaaaaacggcgtcgatggcgaactg
gcgatgaaaatctttgacctggtggaaaaattcgccggttacggatttaacaaatcgcac
tctgccgcctatgctttggtgtcataccagacgctgtggctgaaggcgcactatccggcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaagtggtcggcctg
gtcgatgagtgctggcgcatggggctgaaaattctgccgccggatatcaactcgggtctg
taccatttccacgtcaatgacgatggcgaaattgtttacggcattggcgcgatcaaaggc
gtgggtgaagggccgatcgaggcgatcattgaagcgcgtaacaacggcggctatttccgt
gaactgtttgatctgtgcgcccgcaccgatatcaaaaaactcaatcgccgggtgctggaa
aaattgattatgtccggggcgtttgatcgccttggcccgcatcgtgccgcgctgatgaac
gcgctgggcgatgcgctgaaagccgccgatcagcactcgaaagcagaagcgattgggcag
gcagatatgtttggcgtgctggcagaagaaccggagcagatcgagcagtcctacgccagc
tgccagccatggccggaacaggtggtgctggacggcgagcgtgaaacgttagggttgtac
ctgaccgggcacccgattaaccagtatttaaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgaccgaacgtgggaaagtgaccacggcggcggggctcgtc
attgccgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcgtcttgaagtgatgttgttcactgacgccctggataaataccagcaa
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gcccgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctactatcag
agggcggatgcgcgcgcgcgattacgtttcggcgcaacgtggcgcgtctctccgagcgat
cgtttactcaacgatctgcgtggcctcataggttcggagcaggtggaactggagtttgac
taa
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