Kosakonia pseudosacchari: IP581_04885
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Entry
IP581_04885 CDS
T06897
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_04885 (sbcD)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IP581_04885 (sbcD)
Archaeal homologous recombinant proteins
IP581_04885 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QOV65003
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All DBs
Position
complement(1059754..1060956)
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AA seq
400 aa
AA seq
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MRIIHTSDWHLGQNFYSKNRAAEHDAFLDWLLAAAETHQVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVKLQQTGCQLIVLAGNHDSVATLNESKAILAYLKTTVVASAGTQPFWLYRRDG
EPGAVFCPVPFLRPRDITVSQAGLSGQQKQQHLLAAITDYYQQQFSQACELRGDKPLPII
ASGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPVDYLALGHIHRAQKIGGLEHIRYCGS
PIALSFDETGKSKSVNLVTFAEGKLADVTALEVPETQPLAVIKGDFAEICRQLERWRDAP
TEQTVWLDIEIESHEYLADMQRKIQQVTEALPVEVLLVRRSREQRERILSGELRETLNEL
KVEEVFARRLVLAELDDTQNARLHTLFSEARQALDEENEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacacttcagactggcatctgggtcaaaacttctacagtaaaaaccgc
gccgccgaacatgacgcttttctcgactggctgctcgccgccgccgaaacgcatcaggtg
gatgccattattgtcgcaggcgatattttcgataccggttccccgccaagctacgcccgc
gagctttacaaccgctttgtggtcaaactccagcagacgggctgccagcttatcgtgctg
gcgggaaaccacgattccgtggccacgctgaatgaatcaaaagcgatccttgcctacctg
aaaaccaccgtggtggccagtgcaggcacccagccgttctggctctatcgccgcgatggc
gaacccggtgcggtattttgcccggtgccgtttttacgcccgcgcgatattaccgtgagc
caggcggggctttccggacaacaaaaacagcagcatttgctggcggcgatcaccgattac
tatcaacagcaattttctcaggcctgtgaactgcgcggtgacaaaccactgccgattatc
gccagcggccatttaaccacggtgggtgccagtaaaagtgacgcggtacgtgatatttat
atcggcacgttagacgctttccctgcgcaaaattttccaccggtggattacctcgcgctc
ggccacattcaccgggcgcagaagattggcggcctcgagcatatccgctactgcggctcg
ccgattgcattaagttttgatgaaaccgggaaaagcaaaagcgtcaatctggtgaccttc
gccgaaggtaaactcgccgatgtcacggcgctggaggttccggaaactcagccgctagcg
gtgataaaaggcgatttcgcggaaatttgccgtcagttagaacggtggcgcgatgcgccc
acagagcagaccgtatggctggatatcgaaatcgaaagccatgaatatctggcagatatg
cagcgcaaaatccagcaggtgacagaagctttgccagtcgaagtgctgctggtgcgccgc
agccgtgagcaacgcgaacgcattctctccggcgagttacgcgaaaccttaaacgaatta
aaagtcgaagaggtcttcgcccgccgccttgtgctggcagaactcgacgacacacaaaat
gcgcggttacacacgctgtttagcgaagcgcgccaggcgctggatgaggagaatgaggca
tga
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