Kosakonia pseudosacchari: IP581_05800
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Entry
IP581_05800 CDS
T06897
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse00040
Pentose and glucuronate interconversions
kpse01100
Metabolic pathways
kpse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IP581_05800
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IP581_05800
Enzymes [BR:
kpse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IP581_05800
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GFIT
Motif
Pfam:
Pectate_lyase_2
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
QOV65176
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Position
complement(1255447..1257156)
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AA seq
569 aa
AA seq
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MKLSKIALAVGLLGIFSCTAFAQESARLNSVKAFADTVINKAGDKYHSNVPLLADGVDPR
TGKQMEWVFPDGKTAVLSNFSAQQNLMRVLVGLSNLTGDAKYKKRAEDNVRYYFQHYQDK
SGLLLWGGHRFIDLKTLEPQGPSEKEMVHELKNAYPFYDLMFAVDKPATARFIRAFWNAH
VYDWKILETSRHGEYGKEMGKLWASHFEQQPPFFATKGLSFLNAGNDLIYSASLLYHYDG
EKGALTWAKRLAEQYVLPRDKKTGLGVYQFTQALKRAETTDDTDTNSKYGDRAQRQFGPE
FGPDALEGNMMLKGRTSTLYSENALMQLALAKSLGAEGNDIKKWTLDGLKAFAHYAYDEK
TNTFRPMLANGTDLSNYTLPRDGYYGKKGTVLKPYPAGNEFLLSYARAWTLAPDAEIWKV
ARGIAKGQGLGDIGEPGGKNSKLDLNTKNSEPYAIFALIDLWQSTGDKGYLTLADKVADN
ILATKRLNNFFIDDPQYIYANVDNIAPYALLALEAAMRGKPDAVAPFINGAGFTEGAYLL
ADGSVRYSTRDDELFMLKPGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcaaaaatagcactggcggtcggtcttctcggtatcttctcctgcacggca
tttgcgcaggagagcgcacgtttaaacagcgtaaaagcgtttgctgacacggtcattaat
aaagccggtgacaaatatcacagcaatgtgccactgctggcagatggcgttgatccgcgt
accggtaaacagatggagtgggtcttcccggatggaaaaacggcggtactttccaacttc
tccgcacagcagaatctgatgcgcgtgctggtgggtctgagtaacctgacgggtgacgcg
aaatataaaaagcgggcggaggataatgtccgttactacttccagcattaccaggacaaa
agcgggctgctgttatggggcgggcaccgctttatcgatctgaaaacgcttgaaccacaa
gggccaagcgaaaaagagatggtccatgaactgaaaaatgcctaccccttctacgacctg
atgtttgccgtggataaaccggcaaccgcccgctttatacgcgcgttctggaacgcacat
gtgtacgactggaaaattctcgaaaccagccgccacggcgaatacggcaaagagatgggc
aaattgtgggccagccactttgaacagcaaccgccattcttcgccaccaaagggctgagc
tttcttaatgcgggcaatgacttaatttattcagcttcgctgttgtatcactacgatggc
gaaaaaggcgcgctcacctgggcgaagcgactggccgagcagtatgtgttgccacgcgat
aaaaaaaccgggctgggcgtttatcaatttacgcaagcgctgaaacgcgccgaaaccacc
gacgacaccgataccaactcgaaatatggcgatcgcgcacagcgccagtttggcccggaa
tttggtcccgacgcgctggaaggcaatatgatgctgaaaggccgcaccagcacgctctac
tccgaaaacgctctgatgcagttagcgctggcaaaatcgctgggcgcggagggcaacgac
atcaaaaagtggacgcttgatggcctgaaagcctttgcgcattacgcctatgatgagaaa
accaacaccttccgcccgatgctggcaaacggcaccgacttgtcgaactacacgctgccg
cgtgacggttattacggcaagaaaggcaccgtgttaaagccttatccggcaggaaatgaa
ttcctgctctcctatgcccgcgcctggacactggcaccggacgcggagatatggaaagtg
gcgcgcggcattgccaaaggccaggggctgggtgatatcggagaaccgggcggcaaaaat
agcaagctggatctgaacaccaaaaacagcgagccgtatgccatttttgcgctgatcgat
ctctggcaatctacgggcgacaaaggatacctgacgctggctgataaagtggcggacaat
attctggcgacaaaacggctgaataattttttcatcgatgatccacagtatatctatgcc
aatgtcgacaatatcgccccgtatgcgctgctggcgctggaagcggccatgcgcggcaaa
cccgatgccgttgcgccatttattaacggcgcaggctttaccgaaggcgcgtacctgctg
gcggatggcagcgtgcgctactccacgcgtgatgatgagttgttcatgctcaaaccgggt
gagcagttgaaacctaacggtaaaaagtaa
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