Kosakonia pseudosacchari: IP581_07075
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Entry
IP581_07075 CDS
T06897
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IP581_07075 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpse03019
]
IP581_07075 (rhlE)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IP581_07075 (rhlE)
Messenger RNA biogenesis [BR:
kpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IP581_07075 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
PCF11_RFEG_rpt
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOV65404
LinkDB
All DBs
Position
1516831..1518306
Genome browser
AA seq
491 aa
AA seq
DB search
MSFDALGLNPEILRAVAEQGYLQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPIRALILTPTRELAAQVGENVQAYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDEIKQLAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIALDGYEPDPSIKAEPIQNGRGQGGGRQGSGRGQGGGGRGQSAPRRSEGE
GQKPRSPRRAEGGAAKQEGGRRGEGSAKPAGGRRLDGGAAKPTGGRRLDGGAAPAGNPSR
RRRPRKPSAAE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatgcccttggcctgaacccggaaatcctgcgcgctgttgccgagcagggt
tatcttcagccgacccctattcagcagcaggctatcccggcggtgctgcaaggccgcgat
ctgatggcaagcgcccagaccggcaccggtaaaacggccggttttacgctgccgctgttg
caacgcctgattcaaaacgagccgcacgccaaaggccgtcgcccgatccgcgcgctgatc
ttaacgccaacccgtgaactggcggcgcaggtgggggaaaacgttcaggcgtacagcaaa
tacctgaatatccgctcgctggtggtattcggtggcgtcagcattaacccgcagatgatg
aagctgcgcggcggcgttgacatcctggtggcgacaccggggcgtctgctggatctggaa
caccagaacgcgctgaaactcgatagcgtggaaatcctggtgctggacgaagccgatcgt
atgctcgatatgggctttatccacgatattcgccgcgtgctggcaaaactgccgccgaag
cgtcagaacctgctgttctccgcgaccttctccgatgagatcaaacagctggcggaaaag
ctgctgcgtaatccgctggagatcgaagtggcgcgccgcaataccgcctctgagcaggtg
acacagcatgtgcatttcgttgataaaaaacgcaaacgggaactgctgtcgcagatgatt
ggcgagggcaactggcagcaggtgctggttttcacccgtacgaaacacggcgctaaccac
ctggcagagcagcttaataaagacggcatcaccagcgcggcgatccacggcaataaaagc
cagggcgcgcgtacgcgtgcgctggcggatttcaaatctggcgacattcgtgtgctggta
gcgaccgacatcgcggcgcgtgggcttgacattgaagagctgccgcatgtggtgaactac
gaactgccgaacgtgccggaagattacgtgcaccgtattggccgtaccggccgtgcggcg
gcgaccggcgaagcgctgtcgctggtatgcgttgacgaacataaactgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgtattgcccttgacggttatgagccggatccg
tcgatcaaagctgagccgattcagaatggtcgcggccagggcggtggtcgtcagggcagt
ggtcgcgggcagggcggcggtggccgtggtcagtctgcgccgcgccgcagtgaaggcgaa
ggacaaaaaccgcgctccccgcgccgcgccgaaggtggcgctgcgaagcaggagggtgga
cgccgtggtgaaggtagtgcgaagccagcgggcgggcgccgccttgatggcggtgccgct
aaaccaacaggtggacgtcgccttgatggcggcgcggcaccggcgggcaacccgtctcgc
cgtcgtcgcccgcgtaagccttccgccgccgagtaa
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