Kosakonia pseudosacchari: IP581_07305
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Entry
IP581_07305 CDS
T06897
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpse03009
]
IP581_07305 (rimO)
Enzymes [BR:
kpse01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IP581_07305 (rimO)
Ribosome biogenesis [BR:
kpse03009
]
Prokaryotic type
ribosomal protein modification factors
IP581_07305 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Methyltransf_2
RNase_II_C_S1
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QOV65448
LinkDB
All DBs
Position
complement(1574603..1575928)
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AA seq
441 aa
AA seq
DB search
MSNVNLQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLAEAKR
LVDAGVKELLVISQDTSAYGVDVKHRMGFHNGEPVKTSMVGLCEQLAKLGVWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKIGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETGVKP
GDVVRVKVENADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtgaacctgcagccgaaaatcggctttgtctctcttggctgtccgaaaaac
ctggtggattccgaacgtattctcaccgagctgcgcaccgaaggctatgacgtggtgcca
agctatgacaacgccgatatggttatcgtcaacacctgcggttttatcgacagcgcggtg
caagagtcactggaagccatcggcgaagcgctgaatgaaaacggcaaggtgattgtgacc
ggctgcctgggcgcaaaagaggatcagatccgcgaagtccatccgaaagtgctggagatc
accgggccgcacagttacgagcaggtgctggagcatgtacaccactatgtgccgaaaccg
aagcacaatccgttcctgagcctggtgccggaacagggcgtaaaactgacgccgcgccac
tacgcttacctgaaaatttccgaaggctgtaaccaccgctgcacgttctgcattatccca
tcgatgcgtggcgatctggtgagccgtccgattggcgacgtgttagccgaagccaaacgt
ctggtcgatgcgggcgtgaaagagctgctggtgatctcgcaggacacttccgcctacggc
gtggatgtcaaacaccgcatgggctttcacaacggcgagccggtgaaaaccagcatggtc
ggcctgtgcgagcaactggcgaagctcggtgtctggacgcgtctgcactacgtttacccg
tacccgcacgtggatgatgtcattccgctgatggcggaaggcaagatcctgccgtatctg
gatattccgctgcaacacgccagcccgcgcattctgaagctgatgaagcgccctggcgcg
gtcgacagacaactggcgcgcattaagcagtggcgtgaaatctgcccggaactgacgctg
cgttccacctttatcgtcggtttccctggcgaaaccgaagaagatttccagatgctgctc
gatttcctcaaagaagcgcgtctggatcgcgtcggctgctttaaatacagcccggtagaa
ggcgcaaccgccaacgaactggccgatcaggtgccggaagaggtgaaagaggagcgctgg
aaccgctttatgcaactgcaacagcagatctccgcggagcgcttgcaggaaaaaatcggc
cgcgaaattctggtgatcatcgatgaagtcgacgaagaaggcgcaattggccgcagcatg
gcagacgcgccggaaatcgacggcgcggtgtacctgaacggcgaaaccggtgttaaaccg
ggcgacgttgtccgcgtgaaagtggaaaacgccgacgaatacgatctgtggggctcccgc
gtttaa
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