Kosakonia pseudosacchari: IP581_08980
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Entry
IP581_08980 CDS
T06897
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03030
DNA replication
kpse03430
Mismatch repair
kpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IP581_08980 (holB)
03430 Mismatch repair
IP581_08980 (holB)
03440 Homologous recombination
IP581_08980 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpse03032
]
IP581_08980 (holB)
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_08980 (holB)
Enzymes [BR:
kpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IP581_08980 (holB)
DNA replication proteins [BR:
kpse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IP581_08980 (holB)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IP581_08980 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
QOV65757
LinkDB
All DBs
Position
1922695..1923699
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPDFEQLVASYQSGRGHHALLIHALPGMGEDALIYAISRFLLCQTPEGHKSCG
HCRGCQLMQAGTHPDYYALAPEKGKSALGIDAVREVSEKLYEHARLGGAKVVWIQDAALL
TDAAANALLKTLEEPPAHTWFFLGCREPARLLATLRSRCRSHHLAPPAENYACSWLAREV
TASHESILTALRLCAGSPGAAEALLQDDAWAQRQTLCQATDAALNSGDWLAMLATLNHDK
VAERLQWFSALLLDALKMQQGATLLSNVDALALVEKLARQVQAPTLHALLHAIFTCREQL
LSVVGVNRELLLTDLLLTLERYQQTGVTLPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggctgcgtcccgattttgagcaactggttgccagttatcagagc
ggtcgtggacaccacgcgttgctgatccacgccctgccggggatgggcgaagatgccctg
atttatgccatcagccgtttcttgctatgccagacacctgaaggccataaaagctgcggt
cactgccgcggttgtcagcttatgcaggctggaacgcaccccgattactatgcactggca
ccggaaaaaggaaaatcggcgcttggcattgacgcggtgcgtgaagtgagtgaaaagctt
tacgaacatgcgcggctgggtggcgcgaaagtggtgtggatccaggatgccgcgttgctg
accgacgctgccgccaacgcgttgctgaagacactggaagaaccgcccgcgcatacctgg
ttcttcctcggctgccgggagccggcgcgattattagcgaccttgcgcagccgctgccgc
tcgcaccaccttgcgcctcccgctgaaaactacgcctgcagctggcttgcacgggaagtt
accgcctcgcatgagtcgattctgaccgcactacgtttgtgcgccggttcgcctggtgcg
gcagaagcgctgcttcaggacgatgcctgggcgcaacggcagacgctttgccaggcaaca
gacgcggcgctgaatagcggtgactggctggcgatgcttgcgacgctcaaccacgacaaa
gtggctgaacgtctgcagtggttctctgcgttgcttcttgatgcattaaaaatgcagcaa
ggcgcgacattgctcagcaatgttgatgccttagcgctggtagaaaagctggcgcgccag
gtgcaagcgccaacgctgcatgcgttgctgcatgctatttttacctgtcgtgaacagttg
cttagtgtggtcggggttaaccgcgagttgctgctgactgatttattgttaacgctggaa
cgttaccagcaaacaggcgtaacgcttcctgtctcccatctgtaa
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