Kosakonia pseudosacchari: IP581_10845
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Entry
IP581_10845 CDS
T06897
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IP581_10845 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kpse03000
]
IP581_10845 (nifA)
Transcription factors [BR:
kpse03000
]
Prokaryotic type
Helix-turn-helix
Other families
IP581_10845 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
HTH_23
AAA_16
MCM
bpMoxR
Parvo_NS1
TIP49
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QOV66100
LinkDB
All DBs
Position
complement(2304196..2305770)
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AA seq
524 aa
AA seq
DB search
MTQRTESGNTVWRFDLSQQFTAMQRISVVLSRATEVEQTLQQVLCVLHNDAFLQHGMICL
YDSQQAILTIEALQEADQQLIPGSSQIRYRPGEGLVGTVLSQGQSLVLARVADDQRFLDR
LGLYDYNLPFIAVPLIGPDAQTFGVLTAQPMARYEERLPACTRFLETVANLVAQTVRLMT
PPAARPSPRAAITPTASPKSCSTSRAFGFENMVGNSPAMRQTMEIIRQVSRWDTTVLVRG
ESGTGKELIANAIHHNSPRASAPFVKFNCAALPDTLLESELFGHEKGAFTGAVRQRKGRF
ELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLQVNVRIIAATNRNLEDEV
RLGHFREDLYYRLNVMPIALPPLRERQEDIAELAHFLVRKIAHNQNRTLRISEGAIRLLM
SYSWPGNVRELENCLERSAVMSENGLIDRDVILFNHRDQPAKPPVISVTHDDNWLDNTLD
ERQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQTMDITLPRL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgaaccgagtcgggtaataccgtctggcgcttcgatttatcccagcagttc
accgcgatgcagcggataagcgtggttctcagccgggcgaccgaggttgaacagacactc
cagcaggtgctgtgcgtattgcacaatgacgcctttttgcagcacggcatgatctgtctg
tacgacagccagcaggcgattttgactattgaagcgttgcaggaagccgatcagcagttg
atccccggcagctcgcaaatccgctaccgtccgggcgaagggctggtcgggacggtgctt
tcgcaggggcaatcgttagtgctggcgcgagtggctgacgatcagcgctttcttgaccgc
ctgggactgtatgattacaacctgccgtttatcgccgtgccgctgatagggccggatgcg
cagacttttggcgtgctgacggcgcaaccgatggcgcgttacgaagagcggttacccgcc
tgcacccgctttctggaaacggttgcgaatctggtggcgcagaccgtgcgtttgatgacg
ccgccggcagcacgcccttccccacgcgctgccatcacgccgacagccagcccgaaatcg
tgcagtacttcacgcgcgttcggcttcgaaaatatggtcggcaacagcccggcaatgcgc
cagaccatggagattatccgtcaggtttcgcgctgggacaccaccgttctggtgcgcggc
gagagcggcaccggtaaggaactgattgccaacgccattcaccataattcaccgcgcgcc
agtgcgccgtttgtgaaattcaactgtgcggcgctgccggacacattgcttgaaagcgaa
ttgttcggtcatgaaaaaggggcctttaccggtgcggtacgccagcgtaaaggccgtttt
gagctggccgatggcggcacgctgtttcttgacgaaattggggaaagcagcgcctcgttt
caggctaagctgctgcgcattttgcaggagggcgaaatggaacgtgtcggcggtgacgag
acattgcaagtgaatgtgcgcatcattgccgcgacgaaccgcaaccttgaagatgaagta
cgcctgggacactttcgcgaagatctctattaccgcctgaatgtgatgcctatcgccctg
ccgccgctgcgcgagcgccaggaggacatcgcagaattggcacattttctggtgcgtaaa
atcgcccacaaccagaaccgcacgctgcgcattagtgagggcgctatccgcttgctgatg
agctacagctggcccggcaatgtgcgcgaactggaaaactgccttgagcgctctgcggtg
atgtcggaaaacggtctgatcgatcgggacgtgattttatttaatcatcgcgaccagcca
gccaaaccgccggttatcagcgtcacgcacgacgataactggctcgataacacccttgac
gagcgccagcggctgattgccgcgctggaaaaagcgggatgggtacaagccaaagccgcc
cgcttgctggggatgacgccacgccaggtcgcttatcgtattcagaccatggatataacc
ctgccaaggctataa
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