Kosakonia pseudosacchari: IP581_12095
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Entry
IP581_12095 CDS
T06897
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpse03016
]
IP581_12095
Enzymes [BR:
kpse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IP581_12095
Transfer RNA biogenesis [BR:
kpse03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IP581_12095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
QOV62034
LinkDB
All DBs
Position
2583602..2585536
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDKI
IAVIHSDKDRESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFAEDHFVPWWVTLARHNLEKEAPNGVAT
GMLDDGLQRVDLTALDFVTIDSASTEDMDDALYVAETAEGELQLTVAIADPTAWIAEGSK
LDEAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALVCRMTLDADGAIKDNIEF
FAATIESKAKLAYDDVSDWLENTGNWQPTNDAIAGQIRLLQRVSQLRAQWRQNHALVFKD
RPDYRFVLGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHLGFD
PANSEQLAAMLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISVE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETPKRPQDDATVQMSERRRLNRM
AERDVGDWLYARFLQNKAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGETVFKVTDVIDVTIAEVRMETRSVIARPVL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggacaacccgctgctagcgcagcttaaacagcaacttcattcccaaactccg
cgtgcggaaggtgttgtaaaaggcactgaaaaaggctttggatttctggaagtcgacgcg
caaaaaagctacttcattccgccaccgcagatgaagaaagtgatgcacggcgacaagatt
attgccgtcatccacagcgataaagaccgtgaaagcgcggagcctgaagagctggtcgag
ccattcttgacccgttttgttggcaaagtgcaaaagaaagacgatcgcctctctattgtg
ccggatcatccgttgctaaaagatgccatcccctgccgcgccgcccgtggcgttgagcat
gatttcaaagaaggcgactgggctgtcgctgaaatgcgtcgtcacccgctgaaaggcgat
cgcggtttctacgctgaactgacgcagttcattaccttcgccgaagaccactttgtgccg
tggtgggtcacactggcgcgtcacaatctggaaaaagaagcgccaaatggcgtggcgacc
gggatgctggatgacggcctgcagcgcgtggatttaaccgcgctggattttgtcaccatc
gacagcgccagtaccgaagatatggacgatgcgctgtatgttgcagagactgccgaaggc
gaactgcaactgaccgtggcaatcgccgatcctacagcctggattgccgaaggcagtaag
ctcgacgaggccgcgaagatccgcgccttcaccaactatctgccgggtttcaatatcccg
atgttgccgcgtgaactctctgacgatctttgctcgctgcgcgcgaacgaagtgcgtccg
gcgctcgtttgccgcatgacgctggatgccgacggcgctatcaaagacaatatcgagttt
ttcgcggcgaccatcgaatcgaaagccaaactggcttatgacgatgtgtccgactggctg
gaaaataccggcaactggcaaccgacaaacgatgcgatcgccgggcagatccgcctgctg
cagcgcgttagccagctgcgcgcccaatggcgccagaatcacgcgctggtctttaaagac
cgcccggattaccgctttgtgcttggcgataaaggcgaagtgctggatatcgtcgccgag
ccacgccgcattgctaaccgcatcgttgaagaatcaatgattgccgccaatatctgcgcc
gcacgcgtactgcgcgacaagctcggttttggcatttataacgtacacctcggtttcgac
ccggcgaacagcgaacaactggccgcgatgctgaaaacccatggtatgcacgttgatgcc
gaagaagtgctgacgctggaaggtttctgcaaattgcgtcgcgagctggacgcgcagcct
tcaggcttcctcgatagccgcattcgccgattccagtccttcgcggaaatcagcgttgaa
ccgggcccgcattttggtcttggcctcgaagcatacgcgacctggacctcgcctatccgt
aagtacggcgacatgatcaaccatcgcctgctgaaagcgattatcaaaggcgaaacaccg
aagcgcccgcaggacgatgccactgtgcaaatgtctgagcgccgtcgcctgaaccgcatg
gcggaacgcgatgtcggcgactggctctacgctcgcttcctgcaaaacaaagccggtacc
gaaacccgttttgcggcagaaattattgatgtcagccgcggcggtatgcgcgtacgtctg
gtggataatggtgccgttgcctttattccggctccgtttattcatgcggtgcgcgacgag
ctggtgtgcagccaggaaaatggcaccgtgcaaattaaaggtgaaaccgtctttaaagtg
acagacgttattgatgtcacgattgcggaagtccggatggaaacccgcagcgttattgcc
cgcccggtactgtaa
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