Kosakonia pseudosacchari: IP581_12940
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Entry
IP581_12940 CDS
T06897
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kpse03000
]
IP581_12940
Transcription factors [BR:
kpse03000
]
Prokaryotic type
Helix-turn-helix
Other families
IP581_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
HTH_30
AAA
HTH_28
HTH_1
HTH_7
HTH_psq
HTH_22
HTH_50
HTH_29
HTH_23
AAA_16
HTH_17
Xre-like-HTH
AAA_14
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOV62183
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Position
2755097..2756851
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AA seq
584 aa
AA seq
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MPPRALSLAPAGLPCLLENSWQRSLSYGLTRDDDAQPWVATSMLKDARAENGWVNHLAAP
LLARLRPQLASHPSIMVLSDATGLVLETHGNRDFLQKAQRYALAPGNLWGEHARGTNAIG
TALALQRHCEVSGGEHYLSRNAGLFCSASPVFRPDGQIAGVLDLSTPAQAPRRDAAALIR
RAVCQIEHEWATSALGADRWLLSLHHDPSVLGSAQELLLIFADQTLLGANKLAMDEFSLT
PQHFGELALQTLFPEASLQAGETTLAASNTRRYYARQTLPARRYIGRGAAFVKDQLAKEK
EKALRIVNAGIALCVTGETGSGKEYLARELYARSQWRTGNFVAINCAALPEHLIESELFG
YVPGAFTGASPKGYIGKCREADGGVLFLDEIGDMPLALQTRLLRVLQEKKVTPLGANNVY
DVNFTLICATHQDLAARVQAGTFREDLLYRIQEFHLRIPPLREWQNVDGFIRKLWQELGA
ASRGLTLSDEVIATLAGRPWPGNVRQLLSQLRVLMALAEDGDCITLADLPAEIATTRQPV
VALTPKDEQSAIDEAQGNMSLAAKKLGISRSTLYRRLEKRQISS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacgcgccttgtccctcgctcctgccgggttgccctgcctgcttgaaaactcc
tggcagcgtagtctcagctacgggttgacccgcgatgatgacgcccagccctgggtggcg
acatccatgctgaaagatgcccgtgcggaaaacggttgggtcaaccatctggccgctccg
ctactggcgcggctgcgcccgcagcttgccagtcatccgtcgatcatggtgctttccgac
gctaccggtctggtgctggagacccacggcaaccgcgactttctgcaaaaagcgcagcgc
tatgcgctggcacccggcaacctgtggggcgaacacgcgcgcggcaccaacgcaataggc
acagcgctggcattgcagcgccattgtgaagtctccggcggcgaacattatctcagccgc
aatgcaggtttgttttgctcggcgtcccccgtctttcgaccggacggacaaattgccggg
gtgttagatctctcaacacccgcccaggcaccgcgccgcgatgccgctgcgctgatccgt
cgcgctgtatgccaaatagaacatgagtgggccaccagcgcgcttggcgctgaccgctgg
ctgctgagtttgcatcacgacccgtcggtgctcggcagtgcgcaggagttgttgctgatt
tttgccgatcagacattgctcggtgccaacaaactggcgatggatgagttttcgctgacg
ccgcagcactttggcgaactcgctttgcaaacgctcttcccggaggccagtttgcaggct
ggcgaaaccacgctcgccgccagcaatacccggcgctactacgcacgtcagacgctaccc
gcgcggcgctatatcgggcgcggcgcagcattcgtcaaggatcaactggcgaaggaaaaa
gagaaagcgctgcgcattgtgaatgccgggattgccttgtgcgtcaccggtgaaaccggc
agcggaaaagagtatctggcgcgcgagttatatgcccgcagccagtggcggacgggaaat
ttcgtcgctatcaactgcgcggcgctcccggagcatttgattgagtccgagctgttcggc
tatgttcccggcgcatttacgggcgcaagcccgaaagggtatatcggtaagtgccgggaa
gccgatggtggtgtgctattccttgatgaaattggcgatatgccgctggcgctgcaaacc
cgcctgctgcgcgtgttgcaggagaagaaagtgacgccgcttggcgcaaataacgtgtat
gacgtcaatttcacgctgatttgcgctacccatcaggatctcgccgcccgggtacaggcc
gggacattccgcgaagatctgctgtaccgcattcaggagtttcatctgcgcattcccccc
ttgcgcgaatggcaaaatgttgatgggtttatccggaaactgtggcaggagctgggcgca
gccagccgcggccttaccctgagtgacgaggtgatagccacgctggcgggtcgcccgtgg
ccgggaaatgtgcgccagttactcagccagttgcgggtattgatggcgctggcggaagac
ggcgattgcattacgcttgcggatttaccggccgagatagccaccacgcgacagcccgtg
gttgcgctaacgccgaaggatgagcagagtgcgattgacgaagcgcagggcaatatgagt
ctggccgcaaaaaaactggggatatcgcgcagcaccctttatcggcggctggagaaacgg
caaatcagcagttga
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