Kosakonia pseudosacchari: IP581_13305
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Entry
IP581_13305 CDS
T06897
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpse03016
]
IP581_13305 (rnd)
Enzymes [BR:
kpse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IP581_13305 (rnd)
Transfer RNA biogenesis [BR:
kpse03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IP581_13305 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QOV62254
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All DBs
Position
complement(2830837..2831964)
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AA seq
375 aa
AA seq
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MNYQMITTNDALAALCDAARAFPAIALDTEFVRTRTYYPQLGLIQLYDGEHVALIDPLTI
TDWTPFRDLLINTAVTKYLHAGSEDLEVFLNAFGVQPQPMIDTQILAAFCGRPLSWGFAA
MVEEFTGLVIDKSESRTDWLARPLTERQCDYAAADVWYLLPIAGKLLAETDQAGRLDAAL
DECRLMMQRRQEVLAPEEAWREITNAWQLRTRQLACLRLLADWRLRKARERDLAVNFVVR
EENLWAVARYMPGSMGELDSIGLSGSEIRFHGKTLLALVAQAQALPEEALPEPLLNLMDM
PGYRKAFKAIKALVQTISESQSISAELLASRRQINQLLNWHWKLKPQNSSPELISGWRGE
LMGEQLKILLAEYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgaattaccagatgataacgacgaacgatgcgctcgcagcgttatgtgacgccgcccgc
gcatttccagcgattgccctggacaccgaatttgtccgcacccgcacctattatccgcaa
ctggggttgatccagctgtatgacggtgaacatgtggcgctgattgatccgctgaccatc
accgactggacgccgtttcgcgatttgctcatcaacactgccgtgaccaaatatttgcat
gcggggagtgaagatctggaagtgtttctcaatgcgtttggcgtacagcctcagccgatg
attgacacgcagatcctcgccgcgttctgcggccgcccgctgtcgtggggctttgctgcg
atggtggaagagtttaccgggctggtgattgataagagcgaatcccgcaccgactggctg
gcgcgtccgttaaccgaacgccagtgcgattacgccgccgccgatgtgtggtatctcctg
cctatcgccggtaaattactggcggaaaccgatcaggcgggaaggctggatgccgcgctg
gatgagtgccgcttgatgatgcaacgccgccaggaagtgttagccccggaagaggcgtgg
cgcgaaattaccaacgcctggcaattacgtacgcgccagcttgcctgtctgcgcttactt
gccgactggcgcctgcgtaaagcgcgtgagcgcgatttagccgtcaactttgtggtgcgt
gaagagaatctgtgggcagtggcgcgttacatgcctggcagcatgggcgagctggacagt
attggcctttccggcagcgaaatccgcttccatggcaagacgttgctggcgctggtcgcg
caggcgcaggccttgccggaagaggcgctgccggagcccctgcttaacctgatggacatg
ccgggttatcgtaaagcgttcaaagctatcaaagcgctggtgcagaccatcagcgaaagt
cagagcattagcgctgagctgctggcatcacgtcggcagataaatcaattactcaactgg
cactggaaattgaaaccgcaaaattcgtcaccggaattaattagcggctggcgcggggaa
ttgatgggcgagcagctgaaaatattacttgcggaatacccgcgttaa
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